BLASTX nr result

ID: Cnidium21_contig00045463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045463
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   110   2e-22
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...   106   2e-21
ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...   104   7e-21
emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]   104   7e-21
ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like...   103   1e-20

>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  110 bits (274), Expect = 2e-22
 Identities = 60/96 (62%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -2

Query: 282 YQKES--NPSSGSKISPXXXXXXXXXXXXXXICGILHLFVRFLMRKRSSSQDFQSSRYPE 109
           YQKES  +PSSGS+ISP              I G+LHL VRFL++ RSSS   QS+RY E
Sbjct: 40  YQKESTPSPSSGSRISPAVLFIIVILAVIFFISGLLHLLVRFLVKHRSSSSISQSNRYQE 99

Query: 108 MSNSESFRRQLQQLFNLHDSGLDQTFIDALPVFLYK 1
            S+S +F+RQLQQLF+LHDSGLDQ FIDALPVFLYK
Sbjct: 100 TSSSHAFQRQLQQLFHLHDSGLDQAFIDALPVFLYK 135


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
           gi|223539865|gb|EEF41445.1| ring finger protein,
           putative [Ricinus communis]
          Length = 374

 Score =  106 bits (265), Expect = 2e-21
 Identities = 59/96 (61%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -2

Query: 282 YQKESNPSSGSKISPXXXXXXXXXXXXXXICGILHLFVRFLMRKRSSSQDF--QSSRYPE 109
           YQK+S  SSG+KISP              I G+LHL VRFL++ RSSS     +S+RYPE
Sbjct: 39  YQKQS--SSGNKISPAILFIIVILAVIFFISGLLHLLVRFLIKHRSSSSSSVSESNRYPE 96

Query: 108 MSNSESFRRQLQQLFNLHDSGLDQTFIDALPVFLYK 1
           MS S++F+RQLQQLF+LHDSGLDQ FIDALPVFLYK
Sbjct: 97  MSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYK 132


>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score =  104 bits (260), Expect = 7e-21
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 13/128 (10%)
 Frame = -2

Query: 345 IQHRIKQR--YVLVGQTIVQSP-------FYQKESNPSS----GSKISPXXXXXXXXXXX 205
           IQH+IKQ+  Y+     +  S        F++  + PSS    G++ISP           
Sbjct: 31  IQHQIKQKDGYLTYPPPLTPSSSSPYTAAFHKGSTAPSSSSSSGTRISPAVLFIIVIVAV 90

Query: 204 XXXICGILHLFVRFLMRKRSSSQDFQSSRYPEMSNSESFRRQLQQLFNLHDSGLDQTFID 25
              I G+LHL VRFL+R  SSS   QS+RYPE+S S++ +RQLQQLF+LHDSGLDQ FID
Sbjct: 91  LFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDALQRQLQQLFHLHDSGLDQAFID 150

Query: 24  ALPVFLYK 1
           ALPVFLYK
Sbjct: 151 ALPVFLYK 158


>emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
          Length = 1090

 Score =  104 bits (260), Expect = 7e-21
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 13/128 (10%)
 Frame = -2

Query: 345  IQHRIKQR--YVLVGQTIVQSP-------FYQKESNPSS----GSKISPXXXXXXXXXXX 205
            IQH+IKQ+  Y+     +  S        F++  + PSS    G++ISP           
Sbjct: 724  IQHQIKQKDGYLTYPPPLTPSSSSPYTAAFHKGSTAPSSSSSSGTRISPAVLFIIVIVAV 783

Query: 204  XXXICGILHLFVRFLMRKRSSSQDFQSSRYPEMSNSESFRRQLQQLFNLHDSGLDQTFID 25
               I G+LHL VRFL+R  SSS   QS+RYPE+S S++ +RQLQQLF+LHDSGLDQ FID
Sbjct: 784  LFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDALQRQLQQLFHLHDSGLDQAFID 843

Query: 24   ALPVFLYK 1
            ALPVFLYK
Sbjct: 844  ALPVFLYK 851


>ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 380

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 7/101 (6%)
 Frame = -2

Query: 282 YQKESNPS----SGSKISPXXXXXXXXXXXXXXICGILHLFVRFLMRKRSSSQDF---QS 124
           YQK++ PS    SG++ISP              I G+LHL VRFL+++RSSS +    QS
Sbjct: 40  YQKQTAPSPSSSSGNRISPAILFIIVILAVLFFILGLLHLLVRFLIKQRSSSNNSSIPQS 99

Query: 123 SRYPEMSNSESFRRQLQQLFNLHDSGLDQTFIDALPVFLYK 1
           +RYP+MS+S++++RQLQQLF+LHDSGLDQ FIDALPVF YK
Sbjct: 100 NRYPDMSDSDAYQRQLQQLFHLHDSGLDQAFIDALPVFFYK 140


Top