BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045439
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26162.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...   128   6e-28
ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27

>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/144 (50%), Positives = 96/144 (66%)
 Frame = -3

Query: 435 VETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDVETVTCLILALCKEDKLSEGYDLFR 256
           + TWN  L G++R GR D VW+LY +M+   V  DV TV  L+ A C E+++S+G++L R
Sbjct: 227 IATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLR 286

Query: 255 QCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWLCRNN 76
           + L+DG VPRN AF KLISGF + + Y  VS LLH+MI   R P I  Y E+++ LC+  
Sbjct: 287 RVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGG 346

Query: 75  KAKVGFRIFNDLKDRGYALNSFMY 4
           K   GFR+F DLKDRGYA +  MY
Sbjct: 347 KGPEGFRVFKDLKDRGYAPDRVMY 370



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/139 (24%), Positives = 68/139 (48%)
 Frame = -3

Query: 444 VPKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDVETVTCLILALCKEDKLSEGYD 265
           +P   T+N  ++G  ++G  +  WK+Y +M   G      +   +I  LC   K+ E +D
Sbjct: 399 LPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHD 458

Query: 264 LFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWLC 85
           LF +    G +  ++ +  L+ GF ++ K    + LL+ ++  G  P    Y  +I  LC
Sbjct: 459 LFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLC 518

Query: 84  RNNKAKVGFRIFNDLKDRG 28
           +    +    +++D+++RG
Sbjct: 519 QEGDMQNAKILWDDMQNRG 537


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -3

Query: 441 PKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDV--ETVTCLILALCKEDKLSEGY 268
           P VETWN      ++ GR+D++WKLYE MM  GV+ DV  ETV  LI A C ++K+S  Y
Sbjct: 224 PYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAY 283

Query: 267 DLFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWL 88
           ++ RQ L+DG  P N AF KLISGF +++ ++ V  L+H MIV  R P I  Y EII+  
Sbjct: 284 EILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGF 343

Query: 87  CRNNKAKVGFRIFNDLKDRGYALNSFMY 4
           C+N      F +FN LKDRGYA +  MY
Sbjct: 344 CKNWMTLQAFEVFNALKDRGYAPDMVMY 371



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/139 (27%), Positives = 62/139 (44%)
 Frame = -3

Query: 444 VPKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDVETVTCLILALCKEDKLSEGYD 265
           +P   ++N  + G  ++G  D   KLY+ M+  G +    +   LIL LC   +  E YD
Sbjct: 400 LPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYD 459

Query: 264 LFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWLC 85
            FR+      V   + +  LI GF  + K    + LL  +   G  P    Y  +I  LC
Sbjct: 460 FFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLC 519

Query: 84  RNNKAKVGFRIFNDLKDRG 28
           +    +    ++ND+ +RG
Sbjct: 520 QLGSVQEAKEMWNDMHNRG 538


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -3

Query: 441 PKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDV--ETVTCLILALCKEDKLSEGY 268
           P VETWN      ++ GR+D++WKLYE MM  GV+ DV  ETV  LI A C ++K+S  Y
Sbjct: 188 PYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAY 247

Query: 267 DLFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWL 88
           ++ RQ L+DG  P N AF KLISGF +++ ++ V  L+H MIV  R P I  Y EII+  
Sbjct: 248 EILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGF 307

Query: 87  CRNNKAKVGFRIFNDLKDRGYALNSFMY 4
           C+N      F +FN LKDRGYA +  MY
Sbjct: 308 CKNWMTLQAFEVFNALKDRGYAPDMVMY 335



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/139 (27%), Positives = 62/139 (44%)
 Frame = -3

Query: 444 VPKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDVETVTCLILALCKEDKLSEGYD 265
           +P   ++N  + G  ++G  D   KLY+ M+  G +    +   LIL LC   +  E YD
Sbjct: 364 LPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYD 423

Query: 264 LFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWLC 85
            FR+      V   + +  LI GF  + K    + LL  +   G  P    Y  +I  LC
Sbjct: 424 FFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLC 483

Query: 84  RNNKAKVGFRIFNDLKDRG 28
           +    +    ++ND+ +RG
Sbjct: 484 QLGSVQEAKEMWNDMHNRG 502


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  128 bits (321), Expect = 6e-28
 Identities = 70/149 (46%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
 Frame = -3

Query: 444 VPKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGV--EPDVETVTCLILALCKEDKLSEG 271
           +P   ++N+ L   ++VGR+D+VWKLYE M+  GV    DVETV CLI A C E+K+  G
Sbjct: 161 LPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVFNG 220

Query: 270 YDLFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHW 91
           Y+L RQ L+ G    N  F  LI+GF +Q++Y  VS +LH MI     P I  Y EII+ 
Sbjct: 221 YELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIING 280

Query: 90  LCRNNKAKVGFRIFNDLKDRGYALNSFMY 4
           L +  K    FR+FNDLKDRGY  +  MY
Sbjct: 281 LLKRRKNDEAFRVFNDLKDRGYFPDRVMY 309



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/138 (24%), Positives = 63/138 (45%)
 Frame = -3

Query: 444 VPKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDVETVTCLILALCKEDKLSEGYD 265
           VP   T+N+ + G  +V       KLY+DM   G   +V + + +I  L    K  E   
Sbjct: 338 VPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALS 397

Query: 264 LFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWLC 85
           LF +  + G     +++  LI G  ++ +    + LL+ +++ G  P +  +  +I  LC
Sbjct: 398 LFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLC 457

Query: 84  RNNKAKVGFRIFNDLKDR 31
           +    +   R+  D+ DR
Sbjct: 458 KVGDTEGAMRLLKDMHDR 475


>ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Glycine max]
          Length = 577

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/148 (45%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
 Frame = -3

Query: 441 PKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEP--DVETVTCLILALCKEDKLSEGY 268
           P V TWN  L G +R  R+D+VW LYE MM  GV    +VETV  LI+A C E K+ +GY
Sbjct: 175 PSVATWNASLLGCLRARRTDLVWTLYEQMMESGVVASINVETVGYLIMAFCAEYKVLKGY 234

Query: 267 DLFRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWL 88
           +L ++ L++G  P NV F +LI GF ++ +Y  VS +LH MI     P +  Y EII+ L
Sbjct: 235 ELLKELLENGLCPDNVVFNELIRGFCKEGQYDRVSEILHIMIAKQCNPDVSTYQEIIYGL 294

Query: 87  CRNNKAKVGFRIFNDLKDRGYALNSFMY 4
            +   ++ GF++FNDLKDRGY  +  MY
Sbjct: 295 LKMKNSE-GFQVFNDLKDRGYFPDRVMY 321



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/146 (28%), Positives = 64/146 (43%)
 Frame = -3

Query: 441 PKVETWNLGLNGAIRVGRSDVVWKLYEDMMRCGVEPDVETVTCLILALCKEDKLSEGYDL 262
           P    +N  + G  + G+ D V ++   M+     PDV T   +I  L K  K SEG+ +
Sbjct: 247 PDNVVFNELIRGFCKEGQYDRVSEILHIMIAKQCNPDVSTYQEIIYGLLKM-KNSEGFQV 305

Query: 261 FRQCLKDGNVPRNVAFIKLISGFYEQRKYYGVSALLHAMIVNGRLPGIDIYHEIIHWLCR 82
           F      G  P  V +  +I G  E ++      L   MI  G  P    Y+ ++H  C+
Sbjct: 306 FNDLKDRGYFPDRVMYTTVIKGLCEMQRLGEARKLWFEMIKKGFQPNEYTYNVMMHGYCK 365

Query: 81  NNKAKVGFRIFNDLKDRGYALNSFMY 4
                   +IF D++DRGYA  +  Y
Sbjct: 366 IGDLAEARKIFEDMRDRGYAETTVSY 391