BLASTX nr result

ID: Cnidium21_contig00045379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045379
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28025.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    66   3e-09
ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    66   3e-09
gb|ACU21036.1| unknown [Glycine max]                                   61   8e-08
ref|XP_003620577.1| RING finger family protein [Medicago truncat...    60   1e-07

>emb|CBI28025.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
 Frame = -3

Query: 176 STGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHR--QSPQENEGRLGQSRSGYSG 3
           S+  AVT F+PSLAVV+G+LAVMF+ TF+LL +AK CHR   S +EN+  L +S S +SG
Sbjct: 77  SSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRASNSDRENQQGLTRSESRFSG 136


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
 Frame = -3

Query: 176 STGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHR--QSPQENEGRLGQSRSGYSG 3
           S+  AVT F+PSLAVV+G+LAVMF+ TF+LL +AK CHR   S +EN+  L +S S +SG
Sbjct: 31  SSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRASNSDRENQQGLTRSESRFSG 90


>ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 419

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 IKAHSPEMSTGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHRQ-------SPQEN 42
           ++A +   S+G AV+ FQPSLAVV+G+L VMF+ TF LL +AK CHR+          EN
Sbjct: 21  VRAQTSAPSSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCHRRHGGASAVGDSEN 80

Query: 41  EGRLGQSRSGYSG 3
           +    +SRS +SG
Sbjct: 81  QLTFVRSRSRFSG 93


>gb|ACU21036.1| unknown [Glycine max]
          Length = 419

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 IKAHSPEMSTGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHRQ-------SPQEN 42
           ++A +   S+G AV+ FQPSLAVV+G+L VMF+ TF LL +AK  HR+          EN
Sbjct: 21  VRAQTSAPSSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFGHRRHGGASAVGDSEN 80

Query: 41  EGRLGQSRSGYSG 3
           +    +SRS +SG
Sbjct: 81  QLTFVRSRSRFSG 93


>ref|XP_003620577.1| RING finger family protein [Medicago truncatula]
           gi|355495592|gb|AES76795.1| RING finger family protein
           [Medicago truncatula]
          Length = 362

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
 Frame = -3

Query: 200 IKAHSPEMSTGG--AVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHRQ-------SPQ 48
           I+A SP  +T    AV+ FQPSL VV+ +L +MF  TF+LL FAK CHR+        P 
Sbjct: 19  IRAQSPTQTTNSQDAVSNFQPSLVVVIAILGLMFSLTFILLIFAKVCHRRQLLPISDDPN 78

Query: 47  ENEGRLGQSRSGYSG 3
                L +SRS +SG
Sbjct: 79  NQLATLMRSRSRFSG 93


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