BLASTX nr result
ID: Cnidium21_contig00045379
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00045379 (364 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28025.3| unnamed protein product [Vitis vinifera] 66 3e-09 ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 66 3e-09 ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 66 3e-09 gb|ACU21036.1| unknown [Glycine max] 61 8e-08 ref|XP_003620577.1| RING finger family protein [Medicago truncat... 60 1e-07 >emb|CBI28025.3| unnamed protein product [Vitis vinifera] Length = 413 Score = 66.2 bits (160), Expect = 3e-09 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 2/60 (3%) Frame = -3 Query: 176 STGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHR--QSPQENEGRLGQSRSGYSG 3 S+ AVT F+PSLAVV+G+LAVMF+ TF+LL +AK CHR S +EN+ L +S S +SG Sbjct: 77 SSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRASNSDRENQQGLTRSESRFSG 136 >ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera] Length = 423 Score = 66.2 bits (160), Expect = 3e-09 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 2/60 (3%) Frame = -3 Query: 176 STGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHR--QSPQENEGRLGQSRSGYSG 3 S+ AVT F+PSLAVV+G+LAVMF+ TF+LL +AK CHR S +EN+ L +S S +SG Sbjct: 31 SSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRASNSDRENQQGLTRSESRFSG 90 >ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max] Length = 419 Score = 65.9 bits (159), Expect = 3e-09 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 7/73 (9%) Frame = -3 Query: 200 IKAHSPEMSTGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHRQ-------SPQEN 42 ++A + S+G AV+ FQPSLAVV+G+L VMF+ TF LL +AK CHR+ EN Sbjct: 21 VRAQTSAPSSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCHRRHGGASAVGDSEN 80 Query: 41 EGRLGQSRSGYSG 3 + +SRS +SG Sbjct: 81 QLTFVRSRSRFSG 93 >gb|ACU21036.1| unknown [Glycine max] Length = 419 Score = 61.2 bits (147), Expect = 8e-08 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 7/73 (9%) Frame = -3 Query: 200 IKAHSPEMSTGGAVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHRQ-------SPQEN 42 ++A + S+G AV+ FQPSLAVV+G+L VMF+ TF LL +AK HR+ EN Sbjct: 21 VRAQTSAPSSGDAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFGHRRHGGASAVGDSEN 80 Query: 41 EGRLGQSRSGYSG 3 + +SRS +SG Sbjct: 81 QLTFVRSRSRFSG 93 >ref|XP_003620577.1| RING finger family protein [Medicago truncatula] gi|355495592|gb|AES76795.1| RING finger family protein [Medicago truncatula] Length = 362 Score = 60.5 bits (145), Expect = 1e-07 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 9/75 (12%) Frame = -3 Query: 200 IKAHSPEMSTGG--AVTEFQPSLAVVVGVLAVMFIFTFLLLFFAKCCHRQ-------SPQ 48 I+A SP +T AV+ FQPSL VV+ +L +MF TF+LL FAK CHR+ P Sbjct: 19 IRAQSPTQTTNSQDAVSNFQPSLVVVIAILGLMFSLTFILLIFAKVCHRRQLLPISDDPN 78 Query: 47 ENEGRLGQSRSGYSG 3 L +SRS +SG Sbjct: 79 NQLATLMRSRSRFSG 93