BLASTX nr result

ID: Cnidium21_contig00045350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045350
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002523525.1| protein with unknown function [Ricinus commu...    79   3e-13
emb|CBI25615.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l...    79   4e-13
ref|NP_178186.1| drought-sensitive 1 protein [Arabidopsis thalia...    74   9e-12

>ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|222865999|gb|EEF03130.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
 Frame = -2

Query: 437 VNMREAFVCNSGLDERKFIKELLGVSKNSQVGRSTCTSHKLTEKGDHSNVALDSLRLGPE 258
           V ++E F C   + E    + L G  K      +     K+ ++     V L S+ L PE
Sbjct: 145 VGVKEEFDCFKVVKEEGHDRVLCGPVKRKVENDNLNCGIKIEKREFEGCVDLGSMSLEPE 204

Query: 257 KMARGLPGRVYTMCFLPSNDKRMXXXXXXXXXXXXXXVDSV-DVGDRMYVYRPHSASVSG 81
            +AR +PGR+ T+ F P ND  +              VDS  + GD +++YRPH+  +SG
Sbjct: 205 NIARIMPGRIMTVRFFPRNDINIVAAGNKLGNVAFWNVDSEGEKGDGIFLYRPHTGPISG 264

Query: 80  ILFQQFSMSKIFSCSHDGYIRLMDVE 3
           ILFQQ  +SKIF+  +DGY+RLMD E
Sbjct: 265 ILFQQSCLSKIFTSCYDGYLRLMDAE 290


>ref|XP_002523525.1| protein with unknown function [Ricinus communis]
           gi|223537232|gb|EEF38864.1| protein with unknown
           function [Ricinus communis]
          Length = 530

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = -2

Query: 320 KLTEKGDHSNVALDSLRLGPEKMARGLPGRVYTMCFLPSNDKRMXXXXXXXXXXXXXXVD 141
           K+ +K     V L S+ L  E +AR LPGR+  + FLP ND RM              VD
Sbjct: 201 KIEKKEVEGCVDLWSMNLKQENVARVLPGRIMVVKFLPCNDVRMIVAGNKFGNVAFWNVD 260

Query: 140 SV-DVGDRMYVYRPHSASVSGILFQQFSMSKIFSCSHDGYIRLMDVE 3
           S  + GD +Y++R H+  +SGILFQQ  +SKIF+  +DGY+RLM+ E
Sbjct: 261 SEGEDGDGIYLFRQHTGPISGILFQQSCLSKIFTSCYDGYLRLMNAE 307


>emb|CBI25615.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
 Frame = -2

Query: 395 ERKFIKELLGVSKNSQVGRST---------------CTSHKLTEKGDHSNVALDSLRLGP 261
           +R F+ ++LGVSK SQ+  S                C   + +  G   +V L S+ L  
Sbjct: 81  DRVFLDKILGVSKESQLRNSDKCSADDEVDEKKPLDCLIKRESRGGVEGSVDLGSMTLNA 140

Query: 260 EKMARGLPGRVYTMCFLPSNDKRMXXXXXXXXXXXXXXVDSVDVGDRMYVYRPHSASVSG 81
           E +AR +PGR+  + F P  D  M              VD     D +++Y+PH   VSG
Sbjct: 141 ENIARIMPGRIMNLRFFPCIDSTMIVAGDKSGHIGFWDVDCEKERDGVFLYQPHKDPVSG 200

Query: 80  ILFQQFSMSKIFSCSHDGYIRLMDVE 3
           IL Q+FS SKIF+  + G I+LMD E
Sbjct: 201 ILIQEFSQSKIFTSCYGGSIQLMDAE 226


>ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera]
          Length = 489

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
 Frame = -2

Query: 395 ERKFIKELLGVSKNSQVGRST---------------CTSHKLTEKGDHSNVALDSLRLGP 261
           +R F+ ++LGVSK SQ+  S                C   + +  G   +V L S+ L  
Sbjct: 120 DRVFLDKILGVSKESQLRNSDKCSADDEVDEKKPLDCLIKRESRGGVEGSVDLGSMTLNA 179

Query: 260 EKMARGLPGRVYTMCFLPSNDKRMXXXXXXXXXXXXXXVDSVDVGDRMYVYRPHSASVSG 81
           E +AR +PGR+  + F P  D  M              VD     D +++Y+PH   VSG
Sbjct: 180 ENIARIMPGRIMNLRFFPCIDSTMIVAGDKSGHIGFWDVDCEKERDGVFLYQPHKDPVSG 239

Query: 80  ILFQQFSMSKIFSCSHDGYIRLMDVE 3
           IL Q+FS SKIF+  + G I+LMD E
Sbjct: 240 ILIQEFSQSKIFTSCYGGSIQLMDAE 265


>ref|NP_178186.1| drought-sensitive 1 protein [Arabidopsis thaliana]
           gi|6503282|gb|AAF14658.1|AC011713_6 Contains similarity
           to gb|AF092102 G-protein beta subunit git5p from
           Schizosaccharomyces pombe and contains 2 PF|00400WD
           domain, G-beta repeat domains [Arabidopsis thaliana]
           gi|332198318|gb|AEE36439.1| drought-sensitive 1 protein
           [Arabidopsis thaliana]
          Length = 516

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = -2

Query: 284 LDSLRLGPEKMARGLPGRVYTMCFLPSNDKRMXXXXXXXXXXXXXXVD--SVDVGDRMYV 111
           LD L L P+ +AR +PGR++ + FLP  + +M              +D  + +  D +Y+
Sbjct: 199 LDLLTLEPQNVARVVPGRIFVVQFLPCENVKMVAAGDKLGNVGFWNLDCGNEEDNDGIYL 258

Query: 110 YRPHSASVSGILFQQFSMSKIFSCSHDGYIRLMDVE 3
           + PHSA VS I+FQQ S+S++ S S+DG IRLMDVE
Sbjct: 259 FTPHSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVE 294


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