BLASTX nr result

ID: Cnidium21_contig00045335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045335
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523270.1| exonuclease, putative [Ricinus communis] gi|...    59   1e-15
ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domai...    65   2e-15
emb|CBI20250.3| unnamed protein product [Vitis vinifera]               65   2e-15
ref|XP_003628533.1| Exonuclease domain-containing protein, putat...    63   9e-14
gb|ACJ86298.1| unknown [Medicago truncatula]                           63   1e-13

>ref|XP_002523270.1| exonuclease, putative [Ricinus communis]
           gi|223537483|gb|EEF39109.1| exonuclease, putative
           [Ricinus communis]
          Length = 329

 Score = 58.9 bits (141), Expect(3) = 1e-15
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +1

Query: 169 LDFFHRFVRPSEMSEQRINQYIEGKYGKIGVQR 267
           +D FHRFVRPS MSEQRIN+YIE KYGK GV R
Sbjct: 147 VDLFHRFVRPSAMSEQRINEYIENKYGKFGVDR 179



 Score = 38.5 bits (88), Expect(3) = 1e-15
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +2

Query: 71  PSTICHFLVLDLEGKVEI---PVLMIEAKTLEIVDYLISF 181
           P     FLV DLEGKVEI   PVL+I+AKT+  VD    F
Sbjct: 114 PQDFEFFLVFDLEGKVEILEFPVLIIDAKTMAFVDLFHRF 153



 Score = 29.6 bits (65), Expect(3) = 1e-15
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 21  DFSGELKINASDMKHVRPQQFVIFL 95
           D S +L +NA+D K  RPQ F  FL
Sbjct: 97  DCSRDLPVNAADFKRKRPQDFEFFL 121


>ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domain-containing protein
           At3g15140 [Vitis vinifera]
          Length = 319

 Score = 64.7 bits (156), Expect(2) = 2e-15
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +1

Query: 166 LLDFFHRFVRPSEMSEQRINQYIEGKYGKIGVQR 267
           ++D FHRFVRPSEMSEQRIN+YIEGKYGK+GV R
Sbjct: 137 VVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDR 170



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 22/34 (64%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
 Frame = +2

Query: 89  FLVLDLEGKVEI---PVLMIEAKTLEIVDYLISF 181
           FLVLDLEGK+EI   PVLMI AKT+++VD    F
Sbjct: 111 FLVLDLEGKIEILEFPVLMINAKTMDVVDLFHRF 144


>emb|CBI20250.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score = 64.7 bits (156), Expect(2) = 2e-15
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +1

Query: 166 LLDFFHRFVRPSEMSEQRINQYIEGKYGKIGVQR 267
           ++D FHRFVRPSEMSEQRIN+YIEGKYGK+GV R
Sbjct: 74  VVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDR 107



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 22/34 (64%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
 Frame = +2

Query: 89  FLVLDLEGKVEI---PVLMIEAKTLEIVDYLISF 181
           FLVLDLEGK+EI   PVLMI AKT+++VD    F
Sbjct: 48  FLVLDLEGKIEILEFPVLMINAKTMDVVDLFHRF 81


>ref|XP_003628533.1| Exonuclease domain-containing protein, putative [Medicago
           truncatula] gi|355522555|gb|AET03009.1| Exonuclease
           domain-containing protein, putative [Medicago
           truncatula]
          Length = 308

 Score = 62.8 bits (151), Expect(2) = 9e-14
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 172 DFFHRFVRPSEMSEQRINQYIEGKYGKIGVQR 267
           D FHRFVRPS MSEQRIN+YIEGKYGKIGV R
Sbjct: 132 DIFHRFVRPSNMSEQRINEYIEGKYGKIGVDR 163



 Score = 38.5 bits (88), Expect(2) = 9e-14
 Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
 Frame = +2

Query: 89  FLVLDLEGKVEI---PVLMIEAKTLEIVDYLISF 181
           FLVLDLEGKVEI   PVL I AKTL++ D    F
Sbjct: 104 FLVLDLEGKVEILEFPVLKISAKTLKVEDIFHRF 137


>gb|ACJ86298.1| unknown [Medicago truncatula]
          Length = 252

 Score = 62.8 bits (151), Expect(2) = 1e-13
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 172 DFFHRFVRPSEMSEQRINQYIEGKYGKIGVQR 267
           D FHRFVRPS MSEQRIN+YIEGKYGKIGV R
Sbjct: 76  DIFHRFVRPSNMSEQRINEYIEGKYGKIGVDR 107



 Score = 38.5 bits (88), Expect(2) = 1e-13
 Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
 Frame = +2

Query: 89  FLVLDLEGKVEI---PVLMIEAKTLEIVDYLISF 181
           FLVLDLEGKVEI   PVL I AKTL++ D    F
Sbjct: 48  FLVLDLEGKVEILEFPVLKISAKTLKVEDIFHRF 81


Top