BLASTX nr result

ID: Cnidium21_contig00045322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045322
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
gb|AEO86797.1| cyclin [Camellia sinensis]                              97   1e-18
ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223...    94   1e-17
emb|CBI19854.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]            89   5e-16

>ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  105 bits (262), Expect = 4e-21
 Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
 Frame = +1

Query: 7   RKALSTINQNHVRAAPYPSAVSKSALRENKAICGKKSHIPGLHPPMTRMLTAQIATKQHE 186
           R+ALS IN+N +   PYP AV+K  L E +A C K   IP +H P+TR   AQ+A KQ +
Sbjct: 36  RRALSNINRNIIGGPPYPCAVNKRGLSEREAFCNKNPPIP-VHRPLTRKYAAQLANKQQQ 94

Query: 187 VL-AEKIKQPVIEI-------DCSVIHMDECKARDSFPEPVFGQHDLT----------XX 312
            L  E+IK+PV  +       DC++I ++  K  D F  P F QH               
Sbjct: 95  QLEPEEIKKPVRPVPISSEPEDCNIIDVEGYKTSDDFSAPTFVQHTEAMLEEIDRMDEVE 154

Query: 313 XXXXXXXXXXXXXXXXXXXXXXVVEYMDDLYEYYRNVESSFYVPPNYMASQLNINKK 483
                                 VVEY+DDLY +Y+  E S  VPPNYMA Q +IN +
Sbjct: 155 MEDVEEEPVLDIDGCDKRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDR 211


>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 67/180 (37%), Positives = 91/180 (50%), Gaps = 21/180 (11%)
 Frame = +1

Query: 7   RKALSTINQNHVRAAPYPSAVSK-SALRENKAICGKKSHIP----GLHPPMTRMLTAQIA 171
           R+ALSTIN+N V A PYP AV+K  AL E+  +   K+H P      H P+TR   AQ+A
Sbjct: 36  RRALSTINRNIVGAHPYPCAVNKRPALSEDNGL-SNKNHPPIPPIPAHRPITRKFAAQMA 94

Query: 172 TKQHEVLAEKIKQPVIEI-------DCSVIHMDECKARDSFPEPVFGQHD---------L 303
            KQ + L E+ K+ V  +       DCS+I +D+ KA    P P+F QH          +
Sbjct: 95  GKQKQPLPEETKKVVQSLPVPTESGDCSIIDVDDYKAAGDSPVPMFVQHTEAMLEEIDRM 154

Query: 304 TXXXXXXXXXXXXXXXXXXXXXXXXVVEYMDDLYEYYRNVESSFYVPPNYMASQLNINKK 483
                                    VVEY+DD+Y YY+ VESS  V PNY+  Q +IN++
Sbjct: 155 EVEMEDTTDDPVDDIDTSDKRNPLAVVEYIDDIYAYYKKVESSSCVLPNYIGQQFDINER 214


>ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223551376|gb|EEF52862.1|
           cyclin B, putative [Ricinus communis]
          Length = 438

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 64/177 (36%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
 Frame = +1

Query: 7   RKALSTINQNHVRAAPYPSAVSKSALRENKAICGKKSHIPGLHPPMTRMLTAQIATKQHE 186
           R+ALS+IN+N + A PYP AV+K    E +AICGK   IP +H P+TR   AQ+A KQ +
Sbjct: 39  RRALSSINRNIIGAPPYPCAVNKRGPSERQAICGKNPSIP-VHRPITRKFAAQLANKQ-Q 96

Query: 187 VLAEKIKQPVIEI-------DCSVIHMDEC-KARDSFPEPVFGQHDLT----------XX 312
              E+IK+P   I       DC++I  ++  K    F  P+F QH               
Sbjct: 97  PKPEEIKKPDHSIPISSDPEDCTIIDAEDYNKTNGDFSVPMFVQHTEAMLEEIDRMEEVE 156

Query: 313 XXXXXXXXXXXXXXXXXXXXXXVVEYMDDLYEYYRNVESSFYVPPNYMASQLNINKK 483
                                 VVEY+DDLY +YR  E S   P NYM+ Q +IN++
Sbjct: 157 MEDVVEEPFMDIDSYDKKNPLAVVEYIDDLYNFYRKAELSSCAPSNYMSQQSDINER 213


>emb|CBI19854.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
 Frame = +1

Query: 7   RKALSTINQNHVRAAPYPSAVSKSALRENKAICGKKSHIPGLHPPMTRMLTAQIAT--KQ 180
           R+ALS+I++N +   PYP AV+K AL E +A C KK     +H P+TR   AQ+A+  +Q
Sbjct: 38  RRALSSIDRNIIGVPPYPCAVNKRALSEKEAACDKKHPPIPMHRPITRKFAAQMASNKQQ 97

Query: 181 HEVLAEKIKQPVIEI------DCSVIHMDECKARDSFPEPVFGQH-----------DLTX 309
              + E+ ++ V++       DC  +  ++CK     P P+  QH           +   
Sbjct: 98  RAAIPEESRKLVLQSAPSELKDCVFVDAEDCKGTSDLPVPMSVQHTEAMLEEIDRMEEEI 157

Query: 310 XXXXXXXXXXXXXXXXXXXXXXXVVEYMDDLYEYYRNVESSFYVPPNYMASQLNINKK 483
                                  VVEY+D++Y YYR  ESS  V P+YM+ Q +IN +
Sbjct: 158 EMEDLVKEPVMDIDGSDNKNSLAVVEYIDEIYAYYRKTESSSCVSPDYMSQQFDINDR 215


>ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]
          Length = 437

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
 Frame = +1

Query: 7   RKALSTINQNHVRAAPYPSAVSKSALRENKAICGKKSHIPGLHPPMTRMLTAQIAT-KQH 183
           R+ALS+I++N +   PYP AV+K AL E +A C KK     +H P+TR   AQ+A+ KQ 
Sbjct: 38  RRALSSIDRNIIGVPPYPCAVNKRALSEKEAACDKKHPPIPMHRPITRKFAAQMASNKQQ 97

Query: 184 EVLAEKI---KQPVIEIDCSVIHMDECKARDSFPEPVFGQH-----------DLTXXXXX 321
              + K+     P    DC  +  ++CK     P P+  QH           +       
Sbjct: 98  RAESRKLVLQSAPSELKDCVFVDAEDCKGTSDLPVPMSVQHTEAMLEEIDRMEEEIEMED 157

Query: 322 XXXXXXXXXXXXXXXXXXXVVEYMDDLYEYYRNVESSFYVPPNYMASQLNINKK 483
                              VVEY+D++Y YYR  ESS  V P+YM+ Q +IN +
Sbjct: 158 LVKEPVMDIDGSDNKNSLAVVEYIDEIYAYYRKTESSSCVSPDYMSQQFDINDR 211


Top