BLASTX nr result

ID: Cnidium21_contig00045320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045320
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   100   1e-19
emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]    98   8e-19
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    94   2e-17
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    90   2e-16
dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609...    79   4e-13

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/112 (45%), Positives = 62/112 (55%)
 Frame = +1

Query: 1    KLELPSYSKLHSVFHVSQLKKAVGAAPVSPTLPTQLTAXXXXXXXXXXXXXXXXXXTGGG 180
            KL+LP  SK+H VFHVS LKK VG  PV PT+P  +                     G  
Sbjct: 1497 KLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQ 1556

Query: 181  LKLEALIQWKDLPRFDATWEEVSALASQYPKFHLEDKVKVWVGGTVMDQKSK 336
               E LI+WK LP F+ATWE++S +  ++P FHLEDKV VW  G VM Q  K
Sbjct: 1557 TFTECLIKWKGLPAFEATWEDMSPIHLRFPSFHLEDKVNVWGAGIVMHQLKK 1608


>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1    KLELPSYSKLHSVFHVSQLKKAVGAAPVSPTLPTQLTAXXXXXXXXXXXXXXXXXXTGGG 180
            +L LP  S +H +FH+SQL+KAVG AP S +LP+QLTA                  TG  
Sbjct: 702  RLTLPPSSTIHPMFHISQLRKAVGTAPTSSSLPSQLTAEMELLVEPRTILGVRQCLTGST 761

Query: 181  LKLEALIQWKDLPRFDATWEEVSALASQYPKFHLEDKVKVWVGG-TVM 321
               E L+QWKDL  F+ATWE  + + +Q+P+FHL DKV V  GG TVM
Sbjct: 762  FVTEVLVQWKDLLDFEATWESFATIQNQFPEFHLVDKVAVREGGYTVM 809


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1    KLELPSYSKLHSVFHVSQLKKAVGAAPVSPTLPTQLTAXXXXXXXXXXXXXXXXXXTGGG 180
            +L+LP +SK+H VFH+SQL+KAVG APV P LP  LT                       
Sbjct: 1266 ELDLPPHSKIHPVFHISQLRKAVGTAPVFPVLPPLLTTDLVLPSSPSQVLGIRPNPLNQA 1325

Query: 181  LKLEALIQWKDLPRFDATWEEVSALASQYPKFHLEDKVKVWVGGTVMD-QKSKLVYVRTR 357
               E L+QW D+   +ATWE V  +  ++P FHLEDKV  W GG     Q   +++  +R
Sbjct: 1326 APAEILVQWSDMSADEATWENVQDIHERFPTFHLEDKVLNWAGGIARPAQNPPIIHTYSR 1385

Query: 358  K 360
            +
Sbjct: 1386 R 1386


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
 Frame = +1

Query: 1    KLELPSYSKLHSVFHVSQLKKAVGAAPVSPTLPTQLTAXXXXXXXXXXXXXXXXXXTGGG 180
            +L+LP  +KLH VFH+SQLKKAVG+   SPT+P QLT                       
Sbjct: 1430 QLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPA 1489

Query: 181  LKLEALIQWKDLPRFDATWEEVSALASQYPKFHLEDKVKVWVGGTVMDQKSKLV------ 342
               E LI+W +LP F+ATWE+ +   +++P FHLEDKV  W  G++    ++++      
Sbjct: 1490 EVTEVLIKWLNLPAFEATWEDAALFNARFPDFHLEDKVLNW-EGSIAKSPTRIIPPIVHT 1548

Query: 343  YVRTRKK 363
            Y R RKK
Sbjct: 1549 YSRRRKK 1555


>dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609053|dbj|BAG72149.1|
            hypothetical protein [Lotus japonicus]
          Length = 1520

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/112 (40%), Positives = 58/112 (51%)
 Frame = +1

Query: 1    KLELPSYSKLHSVFHVSQLKKAVGAAPVSPTLPTQLTAXXXXXXXXXXXXXXXXXXTGGG 180
            KL+LP  S++H VFH+S LKKAV A   S  LP  LT                    G  
Sbjct: 1390 KLQLPEGSQMHPVFHISLLKKAVNAGVQSQPLPAALTEEWELKVEPEAIMDTRENRDGD- 1448

Query: 181  LKLEALIQWKDLPRFDATWEEVSALASQYPKFHLEDKVKVWVGGTVMDQKSK 336
              LE LI+WKDLP F+ +WE+ S L  Q+P   LEDK+ +  G  V +  S+
Sbjct: 1449 --LEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKLSLQGGRDVANPSSR 1498


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