BLASTX nr result

ID: Cnidium21_contig00045318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045318
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEH25587.1| transposase [Solanum demissum]                          65   2e-08
gb|AAP53948.1| transposon protein, putative, Mutator sub-class [...    59   9e-07
gb|EAY99133.1| hypothetical protein OsI_21092 [Oryza sativa Indi...    59   9e-07
ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [S...    59   1e-06
ref|XP_002440720.1| hypothetical protein SORBIDRAFT_09g005600 [S...    55   1e-05

>gb|AEH25587.1| transposase [Solanum demissum]
          Length = 1124

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 47/151 (31%), Positives = 65/151 (43%)
 Frame = -2

Query: 556  RWCCITMVRWTELSGIPCFHAVACYHSRNMDPTQGIHMCYSRAKHXXXXXXXXXXXXXXX 377
            RW C   V W +L GIPC HAVA  + +  +P   I  CYS+A +               
Sbjct: 760  RWTCSCRV-W-QLKGIPCAHAVAAIYFKKCEPLDYIDNCYSKATY--------------- 802

Query: 376  XXXLYYICLRS*MDRFTVIS*NQLTESSSGNKPYARPLPPNVKVAPGRAKKRSRKNDIPK 197
                    LR+  +    ++  ++   S+ N   A   PP +K  PGR  K  +K     
Sbjct: 803  --------LRTYANVLQPVTNMEMWPVST-NPTVA---PPEIKSMPGRPGKLRKKEAGES 850

Query: 196  EDPIKLVRQGTTNVCSYCKLSGHNKRSCPAK 104
            +   KL R G    CS C + GHNKR CP +
Sbjct: 851  KKSGKLPRTGLAMTCSNCNIRGHNKRGCPQR 881


>gb|AAP53948.1| transposon protein, putative, Mutator sub-class [Oryza sativa
            Japonica Group]
          Length = 1005

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 42/144 (29%), Positives = 55/144 (38%), Gaps = 1/144 (0%)
 Frame = -2

Query: 532  RWTELSGIPCFHAVACYHSRNMDPTQGIHMCYSRAKHXXXXXXXXXXXXXXXXXXLYYIC 353
            R+ ++SGIPC HA A       +P   IH C+S  ++                       
Sbjct: 741  RYWQVSGIPCQHACAALFKMAQEPNNCIHECFSLERYKKTYQHVLQPVEH---------- 790

Query: 352  LRS*MDRFTVIS*NQLTESSSGNKPYARPLPPNVKVAPGRAKKRSRKN-DIPKEDPIKLV 176
                             ES+    P  +PLPP VK  PGR KK  RK+   P +   K  
Sbjct: 791  -----------------ESAWPVSPNPKPLPPRVKKMPGRPKKNRRKDPSKPVKSGTKSS 833

Query: 175  RQGTTNVCSYCKLSGHNKRSCPAK 104
            + GT   C  C   GHN R+C  K
Sbjct: 834  KVGTKIRCRRCGNYGHNSRTCCVK 857


>gb|EAY99133.1| hypothetical protein OsI_21092 [Oryza sativa Indica Group]
          Length = 1005

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 42/144 (29%), Positives = 55/144 (38%), Gaps = 1/144 (0%)
 Frame = -2

Query: 532  RWTELSGIPCFHAVACYHSRNMDPTQGIHMCYSRAKHXXXXXXXXXXXXXXXXXXLYYIC 353
            R+ ++SGIPC HA A       +P   IH C+S  ++                       
Sbjct: 741  RYWQVSGIPCQHACAALFKMAQEPNNCIHECFSLERYKKTYQHVLQPVEH---------- 790

Query: 352  LRS*MDRFTVIS*NQLTESSSGNKPYARPLPPNVKVAPGRAKKRSRKN-DIPKEDPIKLV 176
                             ES+    P  +PLPP VK  PGR KK  RK+   P +   K  
Sbjct: 791  -----------------ESAWPVSPNPKPLPPRVKKMPGRPKKNRRKDPSEPVKSGTKSS 833

Query: 175  RQGTTNVCSYCKLSGHNKRSCPAK 104
            + GT   C  C   GHN R+C  K
Sbjct: 834  KVGTKIRCRRCGNYGHNSRTCCVK 857


>ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor]
            gi|241915111|gb|EER88255.1| hypothetical protein
            SORBIDRAFT_10g010620 [Sorghum bicolor]
          Length = 981

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 54/220 (24%), Positives = 76/220 (34%), Gaps = 32/220 (14%)
 Frame = -2

Query: 673  ITMLKEIHKGLMTRIQRRRDKMLSREGIYCTKALASSK--VRWCCITMVRWT-------- 524
            I+M + I K LM RIQ  R +  +  G  C       K  + W     V W         
Sbjct: 668  ISMCEHIRKKLMVRIQENRARAANWTGTICPNVFKKLKMNIEWSGRCYVLWNGEDGFEVQ 727

Query: 523  ---------------------ELSGIPCFHAVACYHSRNMDPTQGIHMCYSRAKHXXXXX 407
                                 +LSG+PC HA++C +  ++     I  CYS+  +     
Sbjct: 728  EREDRKYIVNLQNKECTCRYWQLSGLPCCHAISCIYKASLKLDDFIAPCYSKEAYM---- 783

Query: 406  XXXXXXXXXXXXXLYYICLRS*MDRFTVIS*NQLTES-SSGNKPYARPLPPNVKVAPGRA 230
                                  M    V+   Q  E+  + + P  RPLPP     PGR 
Sbjct: 784  ----------------------MTYQHVLQPVQGPENWPTSDMP--RPLPPAFVKMPGRP 819

Query: 229  KKRSRKNDIPKEDPIKLVRQGTTNVCSYCKLSGHNKRSCP 110
            K + R+    +    KL + GT   C  C    HN R CP
Sbjct: 820  KTQRRREQGEEPKGTKLSKVGTKMTCRLCGKQDHNSRRCP 859


>ref|XP_002440720.1| hypothetical protein SORBIDRAFT_09g005600 [Sorghum bicolor]
            gi|241946005|gb|EES19150.1| hypothetical protein
            SORBIDRAFT_09g005600 [Sorghum bicolor]
          Length = 815

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 49/197 (24%), Positives = 68/197 (34%), Gaps = 9/197 (4%)
 Frame = -2

Query: 673  ITMLKEIHKGLMTRIQRRRDKMLSREGIYCTKALASSKVRW----CCITMVRWT-----E 521
            I+M + I K +M RIQ  R ++    G  C       K+      CC+ +  W      E
Sbjct: 576  ISMNEAIRKKVMIRIQENRSRVEKWPGTICPNVFRKLKLNIERSRCCLVL--WNGADGFE 633

Query: 520  LSGIPCFHAVACYHSRNMDPTQGIHMCYSRAKHXXXXXXXXXXXXXXXXXXLYYICLRS* 341
            LSG+PC H ++C +  +      I  CY+   +                           
Sbjct: 634  LSGLPCCHTISCIYKASKKLDDYIAPCYTIDAYKKTYAHVLQPI---------------- 677

Query: 340  MDRFTVIS*NQLTESSSGNKPYARPLPPNVKVAPGRAKKRSRKNDIPKEDPIKLVRQGTT 161
                       L    + N P  RP PP     PGR K   R+    +    KL R G  
Sbjct: 678  ---------EGLDNWPTTNMP--RPEPPAFVKKPGRPKTERRREQGEEPKGTKLSRVGIK 726

Query: 160  NVCSYCKLSGHNKRSCP 110
              C  C  + HN R CP
Sbjct: 727  MRCRICGTTWHNSRRCP 743


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