BLASTX nr result

ID: Cnidium21_contig00045307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045307
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]         55   8e-06
ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea ma...    55   8e-06

>gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]
          Length = 407

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +3

Query: 24  LLSLEASRYPSRYK-QKNIDLYSTWFGLNPPYRAVVPKPADRSCYPRENSVAVYKEAFYD 200
           L  L A R+ S ++ Q +ID     +G+   Y AV+P    R+C P  ++V+VY  A   
Sbjct: 42  LSGLVAERFASSFETQGSIDALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEA 101

Query: 201 GLRIPPSEFVCRLLAEACISPSQL 272
           G+R+P   F C +LA   ++PSQ+
Sbjct: 102 GMRVPLHGFFCEVLAHFGVAPSQI 125


>ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea mays]
           gi|194694258|gb|ACF81213.1| unknown [Zea mays]
           gi|413952966|gb|AFW85615.1| hypothetical protein
           ZEAMMB73_558830 [Zea mays]
          Length = 513

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +3

Query: 24  LLSLEASRYPSRYK-QKNIDLYSTWFGLNPPYRAVVPKPADRSCYPRENSVAVYKEAFYD 200
           L  L A R+ S ++ Q +ID     +G+   Y AV+P    R+C P  ++V+VY  A   
Sbjct: 42  LSGLVAERFASSFETQGSIDALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEA 101

Query: 201 GLRIPPSEFVCRLLAEACISPSQL 272
           G+R+P   F C +LA   ++PSQ+
Sbjct: 102 GMRVPLHGFFCEVLAHFGVAPSQI 125


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