BLASTX nr result

ID: Cnidium21_contig00045251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045251
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632756.1| PREDICTED: DNA replication complex GINS prot...   113   1e-23
ref|XP_003530075.1| PREDICTED: probable DNA replication complex ...   113   2e-23
ref|XP_003522893.1| PREDICTED: probable DNA replication complex ...   113   2e-23
ref|XP_004135842.1| PREDICTED: probable DNA replication complex ...   111   5e-23
ref|XP_003597996.1| DNA replication complex GINS protein PSF1 [M...   111   7e-23

>ref|XP_003632756.1| PREDICTED: DNA replication complex GINS protein PSF1-like [Vitis
           vinifera] gi|297743415|emb|CBI36282.3| unnamed protein
           product [Vitis vinifera]
          Length = 197

 Score =  113 bits (283), Expect = 1e-23
 Identities = 49/79 (62%), Positives = 69/79 (87%)
 Frame = -3

Query: 239 MYGKKASELVKEFASSEPGQLSAFNNDLFSQVLEECNGHLLHLQSLLRKMQEDGPDDQTS 60
           MYG++A +L+KEF+S+E GQL+ FN+D+F QV++EC+ H L LQSL+RK+QE+G D QT+
Sbjct: 1   MYGRRACQLIKEFSSAEKGQLTGFNSDMFDQVVKECSTHYLELQSLMRKIQEEGMDIQTT 60

Query: 59  RNADHFGALMHHLSIVRNK 3
           RNADHFG ++HHLS++RNK
Sbjct: 61  RNADHFGMVIHHLSLMRNK 79


>ref|XP_003530075.1| PREDICTED: probable DNA replication complex GINS protein PSF1-like
           [Glycine max]
          Length = 199

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = -3

Query: 239 MYGKKASELVKEFASSEPGQLSAFNNDLFSQVLEECNGHLLHLQSLLRKMQEDGPDDQTS 60
           MYG KAS+LVKEFAS E GQL+ +NNDL  +V+ EC  H L  QSL+RKMQE+G D QT+
Sbjct: 1   MYGSKASQLVKEFASGEKGQLTTYNNDLIREVVAECTQHHLDFQSLIRKMQEEGLDIQTA 60

Query: 59  RNADHFGALMHHLSIVRNK 3
           +NADH+GAL+HHL++VRNK
Sbjct: 61  KNADHYGALIHHLAVVRNK 79


>ref|XP_003522893.1| PREDICTED: probable DNA replication complex GINS protein PSF1-like
           [Glycine max]
          Length = 199

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = -3

Query: 239 MYGKKASELVKEFASSEPGQLSAFNNDLFSQVLEECNGHLLHLQSLLRKMQEDGPDDQTS 60
           MYG KAS+LVKEFAS E GQL+ +NNDL  +V+ EC  H L  QSL+RKMQE+G D QT+
Sbjct: 1   MYGSKASQLVKEFASGEKGQLTTYNNDLIREVVAECTQHHLDFQSLIRKMQEEGLDIQTA 60

Query: 59  RNADHFGALMHHLSIVRNK 3
           +NADH+GAL+HHL++VRNK
Sbjct: 61  KNADHYGALIHHLAVVRNK 79


>ref|XP_004135842.1| PREDICTED: probable DNA replication complex GINS protein PSF1-like
           [Cucumis sativus] gi|449491012|ref|XP_004158773.1|
           PREDICTED: probable DNA replication complex GINS protein
           PSF1-like [Cucumis sativus]
          Length = 200

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = -3

Query: 239 MYGKKASELVKEFASSEPGQLSAFNNDLFSQVLEECNGHLLHLQSLLRKMQEDGPDDQTS 60
           MYG+KA +LVKE AS E GQL+ FN+DLF QV+ EC  H L LQSL+RK+QE+G D QT+
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 59  RNADHFGALMHHLSIVRNK 3
           +N DHFGAL+HHL++VRNK
Sbjct: 61  KNEDHFGALIHHLALVRNK 79


>ref|XP_003597996.1| DNA replication complex GINS protein PSF1 [Medicago truncatula]
           gi|355487044|gb|AES68247.1| DNA replication complex GINS
           protein PSF1 [Medicago truncatula]
          Length = 199

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/79 (68%), Positives = 65/79 (82%)
 Frame = -3

Query: 239 MYGKKASELVKEFASSEPGQLSAFNNDLFSQVLEECNGHLLHLQSLLRKMQEDGPDDQTS 60
           M+G+KA +LVKEFAS E GQL+ FN DLF QV+ EC+ H L LQSL+RKMQE+G D QT+
Sbjct: 1   MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECSQHHLDLQSLIRKMQEEGLDVQTA 60

Query: 59  RNADHFGALMHHLSIVRNK 3
           RNADH+GAL+H  SIVRNK
Sbjct: 61  RNADHYGALIHLFSIVRNK 79


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