BLASTX nr result

ID: Cnidium21_contig00045222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045222
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    97   1e-18
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    97   1e-18
emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]    92   3e-17
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    92   6e-17
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    84   9e-15

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = -2

Query: 310  QKLSARYYGPFPVIAWIGSVAYRLEFPETTKIHSVFHVSQLKRAVGSQPVSPAIPPNXXX 131
            +KL+ R+YGPF V+  IG+ AY+L+ P ++KIH VFHVS LK+ VG+ PV P IPP+   
Sbjct: 1475 EKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDV 1534

Query: 130  XXXXXXXXXXXLGVR-LKTDDNTQTEVLIQWKGKAAWEATWEEL 2
                       L VR ++    T TE LI+WKG  A+EATWE++
Sbjct: 1535 DMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDM 1578


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
 Frame = -2

Query: 313  NQKLSARYYGPFPVIAWIGSVAYRLEFPETTKIHSVFHVSQLKRAVGSQPVSPAIPPNXX 134
            N+KL+ RYYGPFPV+  IG+VAY L+ P  +KIH VFH+SQL++AVG+ PV P +PP   
Sbjct: 1243 NEKLAPRYYGPFPVLKRIGTVAYELDLPPHSKIHPVFHISQLRKAVGTAPVFPVLPPLLT 1302

Query: 133  XXXXXXXXXXXXLGVRLK-TDDNTQTEVLIQWKGKAAWEATWEEL 2
                        LG+R    +     E+L+QW   +A EATWE +
Sbjct: 1303 TDLVLPSSPSQVLGIRPNPLNQAAPAEILVQWSDMSADEATWENV 1347


>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
 Frame = -2

Query: 322 RQGNQKLSARYYGPFPVIAWIGSVAYRLEFPETTKIHSVFHVSQLKRAVGSQPVSPAIPP 143
           ++ N+KLS  YYGPFP+ A +G VAYRL  P ++ IH +FH+SQL++AVG+ P S ++P 
Sbjct: 676 KRRNEKLSPWYYGPFPIEARVGMVAYRLTLPPSSTIHPMFHISQLRKAVGTAPTSSSLPS 735

Query: 142 NXXXXXXXXXXXXXXLGVR-LKTDDNTQTEVLIQWKGKAAWEATWE 8
                          LGVR   T     TEVL+QWK    +EATWE
Sbjct: 736 QLTAEMELLVEPRTILGVRQCLTGSTFVTEVLVQWKDLLDFEATWE 781


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
 Frame = -2

Query: 322  RQGNQKLSARYYGPFPVIAWIGSVAYRLEFPETTKIHSVFHVSQLKRAVGSQPVSPAIPP 143
            ++ N+KL+ R+YGPF V+  IG VAY+L+ P   K+H VFH+SQLK+AVGS   SP IPP
Sbjct: 1404 KKRNEKLAPRFYGPFSVLKRIGQVAYQLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIPP 1463

Query: 142  NXXXXXXXXXXXXXXLGVRLKTDDNTQ-TEVLIQWKGKAAWEATWEE 5
                           L +R       + TEVLI+W    A+EATWE+
Sbjct: 1464 QLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIKWLNLPAFEATWED 1510


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = -2

Query: 322  RQGNQKLSARYYGPFPVIAWIGSVAYRLEFPETTKIHSVFHVSQLKRAVGSQPVSPAIPP 143
            ++ N+KLS RY+GP+ V+  I  VAYRLE P +T IH VFHVS LKRA+GS  +   + P
Sbjct: 880  KRPNEKLSPRYFGPYKVVXQIXXVAYRLELPXSTTIHXVFHVSXLKRALGSADLCQPLSP 939

Query: 142  NXXXXXXXXXXXXXXLGVRLKTDDN-TQTEVLIQWKGKAAWEATWEEL 2
                           L +    ++N    EVLIQWKG   +EA+WE +
Sbjct: 940  ILVEDLEWLVEPDQVLDIHQSPNNNQLGIEVLIQWKGLPQFEASWESV 987


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