BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045201
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299889.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp....    95   7e-18
ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago...    92   4e-17
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...    92   4e-17
gb|ABN06003.1| RNA-binding region RNP-1 (RNA recognition motif) ...    92   4e-17

>ref|XP_002299889.1| predicted protein [Populus trichocarpa] gi|222847147|gb|EEE84694.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = -3

Query: 193 MAKRLCTQLFVSRLSFYTTNQELKKLFSPFGSVTEARLVMDERTLRPKGFGFVTFKSEIE 14
           MA+R+  QLFVSRLS YTTN ELK+LFSPFG+V+EARLV++ +TLRPKGFGFVTF+SE +
Sbjct: 1   MAQRIGLQLFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEAD 60

Query: 13  AQNA 2
           A  A
Sbjct: 61  AHKA 64


>ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310490|gb|EFH40914.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -3

Query: 193 MAKRLCTQLFVSRLSFYTTNQELKKLFSPFGSVTEARLVMDERTLRPKGFGFVTFKSEIE 14
           MAKR  TQLFVSRLS YTT+Q L++LF+PFG + EARL+ D++T RPKGFGF+TF+SE +
Sbjct: 1   MAKRFTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDD 60

Query: 13  AQNA 2
           AQNA
Sbjct: 61  AQNA 64


>ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
           gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding
           protein [Medicago truncatula]
           gi|388509994|gb|AFK43063.1| unknown [Medicago
           truncatula]
          Length = 89

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/64 (67%), Positives = 55/64 (85%)
 Frame = -3

Query: 193 MAKRLCTQLFVSRLSFYTTNQELKKLFSPFGSVTEARLVMDERTLRPKGFGFVTFKSEIE 14
           M++R+ T+LFVSRLSFYTT Q+L+ LFSPFG +TEA L+ D+ T RPKGFGFV++KSEIE
Sbjct: 1   MSQRIGTKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIE 60

Query: 13  AQNA 2
           A+ A
Sbjct: 61  AEKA 64


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = -3

Query: 193 MAKRLCTQLFVSRLSFYTTNQELKKLFSPFGSVTEARLVMDERTLRPKGFGFVTFKSEIE 14
           MA RL +QLFV RLS YTTNQ+L+KLFSPFG V EARLV+D RT +PKGFGFVTF SE +
Sbjct: 1   MAIRLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQ 60

Query: 13  AQNA 2
           AQ A
Sbjct: 61  AQKA 64


>gb|ABN06003.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
           truncatula]
          Length = 83

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/64 (67%), Positives = 55/64 (85%)
 Frame = -3

Query: 193 MAKRLCTQLFVSRLSFYTTNQELKKLFSPFGSVTEARLVMDERTLRPKGFGFVTFKSEIE 14
           M++R+ T+LFVSRLSFYTT Q+L+ LFSPFG +TEA L+ D+ T RPKGFGFV++KSEIE
Sbjct: 1   MSQRIGTKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIE 60

Query: 13  AQNA 2
           A+ A
Sbjct: 61  AEKA 64