BLASTX nr result

ID: Cnidium21_contig00045189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045189
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323391.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002309391.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002532539.1| conserved hypothetical protein [Ricinus comm...    67   1e-09

>ref|XP_002323391.1| predicted protein [Populus trichocarpa] gi|222868021|gb|EEF05152.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
 Frame = +3

Query: 18  MSGVSNLGKALTVIFIFSVIALLSELLYVLWRRRIIFRHHCDPPQAAVEHQPDILLTSNI 197
           M+ ++NLG  LTV+F   + AL+ E+LYVLWRRR   R       A  E + +    S+ 
Sbjct: 1   MNALNNLGIVLTVVFSVCLAALVFEILYVLWRRRRFLRRSVTSSGADGEFRSN----SDS 56

Query: 198 SPTSSKKDLLYFLCLGTQ-SRVEPDGSAPTRRAEGS--IEDDNVEII--DLFKLREMYGP 362
             T   K+LLYF C   Q +R+EPD + P   +  +  +  D  + +  ++ KL+ MYGP
Sbjct: 57  LYTKPSKELLYFFCWKNQTTRIEPDSTTPQEASAVAPPVPADGADALVEEMLKLQGMYGP 116

Query: 363 -RLLFTI 380
            R+LFTI
Sbjct: 117 SRVLFTI 123


>ref|XP_002309391.1| predicted protein [Populus trichocarpa] gi|222855367|gb|EEE92914.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
 Frame = +3

Query: 18  MSGVSNLGKALTVIFIFSVIALLSELLYVLWRRRIIFRHHCDPPQAAVEHQPDILLTSNI 197
           M+ ++NLG  LTV+F   + AL+ E+LYVLWR R   R       A  E       +S  
Sbjct: 1   MNALNNLGTVLTVLFSVCLAALVFEILYVLWRWRRFHRRSVTSSGADGEFSS----SSES 56

Query: 198 SPTSSKKDLLYFLCLGTQ-SRVEPDGSAP--------TRRAEGSIEDDNVEIIDLFKLRE 350
             T+  K+LLYF C  +Q +R+EPD + P        T  A+G  ED  VE  ++ KL+ 
Sbjct: 57  LYTTPSKELLYFFCWKSQMTRIEPDSTTPPAASTAVTTVPADG--EDALVE--EMLKLQG 112

Query: 351 MYGP-RLLFTI 380
           MYGP R LFTI
Sbjct: 113 MYGPSRGLFTI 123


>ref|XP_002532539.1| conserved hypothetical protein [Ricinus communis]
           gi|223527728|gb|EEF29833.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
 Frame = +3

Query: 18  MSGVSNLGKALTVIFIFSVIALLSELLYVLWRRRIIFRHHCDPPQAAVEHQPDILLTSNI 197
           M+ ++ +  ALT+IF  S++ L++E+LYVL+RRR       D     +E   +   TS+ 
Sbjct: 1   MNTLNKICTALTIIFAVSLVVLIAEVLYVLYRRRRFHNRTGD-----LEFSSE---TSSF 52

Query: 198 SPTSSKKDLLYFLCL--GTQSRVEPD-----GSAPTRRAEGSIEDDNVEIIDLFKLREMY 356
            PT+  K+LLYF C    T +R+EPD       A    A  +   D+ ++ ++ K   +Y
Sbjct: 53  YPTTPSKELLYFFCWKNQTSTRIEPDAETAASDAAATAAPPTTTSDDADVDEMLKRHVLY 112

Query: 357 GP-RLLFTI 380
           GP R LFTI
Sbjct: 113 GPSRALFTI 121


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