BLASTX nr result
ID: Cnidium21_contig00045172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00045172
(559 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi... 271 7e-71
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ... 265 4e-69
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,... 264 8e-69
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar... 263 1e-68
emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|726998... 263 1e-68
>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product
[Vitis vinifera]
Length = 900
Score = 271 bits (692), Expect = 7e-71
Identities = 130/186 (69%), Positives = 155/186 (83%)
Frame = +1
Query: 1 FQVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFS 180
FQV+NT+IYAC KQG E+G KWFR+ML+ VRPNVAT GM+MS+YQKG V ++E+ FS
Sbjct: 208 FQVYNTLIYACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMSLYQKGWNVADSEYAFS 267
Query: 181 QMRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGK 360
QMRS I C+SAYSAMITIYTR+ L+DKAEEVI ++EDKVI+N ENWLVL+NAY QQGK
Sbjct: 268 QMRSFGITCQSAYSAMITIYTRMSLYDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGK 327
Query: 361 LQKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRS 540
LQ+AE L SM AGF P+IVAYN +ITGYGK +MDAAQ +F NL+ VGL+PDE+TYRS
Sbjct: 328 LQEAERVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRS 387
Query: 541 MIEGWG 558
MIEGWG
Sbjct: 388 MIEGWG 393
Score = 61.2 bits (147), Expect = 1e-07
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 35/216 (16%)
Frame = +1
Query: 4 QVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAE----- 168
+++N VI C + + ++ F ML PN T+ +++ VY K + ++A
Sbjct: 661 EMYNCVINCCARALPVDELSRLFDEMLLHGFAPNTITLNVMLDVYGKSRLFKKARKVLWL 720
Query: 169 ----------------FTFSQMRSLKIMCESA--------------YSAMITIYTRLRLH 258
+ Q + LK M + Y+ M+ Y +
Sbjct: 721 ARKRGLVDVISYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQI 780
Query: 259 DKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGKLQKAELALISMHKAGFPPHIVAYNTM 438
+ V+ +KE + + ++IN Y +QG +++ L + ++G P + +YNT+
Sbjct: 781 ESFRSVLRRMKESSCASDHYTYNIMINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTL 840
Query: 439 ITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRSMI 546
I YG ++ A L + + G++PD TY ++I
Sbjct: 841 IKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINLI 876
>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315195|gb|EFH45618.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 906
Score = 265 bits (677), Expect = 4e-69
Identities = 126/186 (67%), Positives = 156/186 (83%)
Frame = +1
Query: 1 FQVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFS 180
FQVFNTVIYAC K+G ++ +KWF+MML++ VRPNVATIGMLM +YQK V EAEF FS
Sbjct: 212 FQVFNTVIYACTKKGNVKLASKWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFS 271
Query: 181 QMRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGK 360
MR +I+CESAYS+MITIYTRLRL++KAEEVI L+K+D+V + ENWLV++NAY QQGK
Sbjct: 272 HMRKFEIVCESAYSSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGK 331
Query: 361 LQKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRS 540
+++AE LISM AGF P+I+AYNT+ITGYGKV M+AA+SLF L +GL+PDET+YRS
Sbjct: 332 MEQAESVLISMEAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRS 391
Query: 541 MIEGWG 558
MIEGWG
Sbjct: 392 MIEGWG 397
Score = 64.3 bits (155), Expect = 1e-08
Identities = 43/185 (23%), Positives = 86/185 (46%)
Frame = +1
Query: 4 QVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFSQ 183
+++N VI C + + ++ F M+ PN T +L+ VY K + ++ F
Sbjct: 667 EMYNCVINCCARALPLDELSRTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLL 726
Query: 184 MRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGKL 363
+ ++ +Y+ +I Y + + I ++ D ++ E + L++AY + ++
Sbjct: 727 AKRHGVVDVISYNTIIAAYGKNKDFTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQM 786
Query: 364 QKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRSM 543
+K L M K+ P YN MI YG+ +D + L++ GL PD +Y ++
Sbjct: 787 EKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLKELKESGLGPDLCSYNTL 846
Query: 544 IEGWG 558
I+ +G
Sbjct: 847 IKAYG 851
>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 955
Score = 264 bits (674), Expect = 8e-69
Identities = 124/186 (66%), Positives = 158/186 (84%)
Frame = +1
Query: 1 FQVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFS 180
F+VFNT+IYAC+++G +G KWFRMML++ V+PN+AT GMLM +YQKG V+EAEF FS
Sbjct: 261 FRVFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFS 320
Query: 181 QMRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGK 360
+MRS I+C+SAYSAMITIYTRL L++KAEE+IGL+ EDKV MN ENWLVL+NAY QQG+
Sbjct: 321 KMRSFGIICQSAYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGR 380
Query: 361 LQKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRS 540
L++AE L+ M +A F P+IVA+NT+ITGYGK+ +M AAQ LFL+++ GL+PDETTYRS
Sbjct: 381 LEEAEQVLVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRS 440
Query: 541 MIEGWG 558
MIEGWG
Sbjct: 441 MIEGWG 446
Score = 63.2 bits (152), Expect = 3e-08
Identities = 39/185 (21%), Positives = 85/185 (45%)
Frame = +1
Query: 4 QVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFSQ 183
+++N +I C + ++ F ML PN T +++ VY K + +A+ F
Sbjct: 716 ELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELFWM 775
Query: 184 MRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGKL 363
R ++ +Y+ +I Y + + ++ D ++ E + +++ Y ++G++
Sbjct: 776 ARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQM 835
Query: 364 QKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRSM 543
+ L M ++ + YN MI YG+ +D + L + GL+PD +Y ++
Sbjct: 836 ECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTELRECGLRPDLCSYNTL 895
Query: 544 IEGWG 558
I+ +G
Sbjct: 896 IKAYG 900
>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 263 bits (672), Expect = 1e-68
Identities = 125/186 (67%), Positives = 153/186 (82%)
Frame = +1
Query: 1 FQVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFS 180
+QVFNTVIYAC K+G ++ +KWF MML+ VRPNVATIGMLM +YQK V+EAEF FS
Sbjct: 210 YQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFS 269
Query: 181 QMRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGK 360
MR I+CESAYS+MITIYTRLRL+DKAEEVI L+K+D+V + ENWLV++NAY QQGK
Sbjct: 270 HMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK 329
Query: 361 LQKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRS 540
++ AE L+SM AGF P+I+AYNT+ITGYGK+F M+AAQ LF L +GL+PDET+YRS
Sbjct: 330 MELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRS 389
Query: 541 MIEGWG 558
MIEGWG
Sbjct: 390 MIEGWG 395
Score = 63.9 bits (154), Expect = 2e-08
Identities = 43/185 (23%), Positives = 86/185 (46%)
Frame = +1
Query: 4 QVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFSQ 183
+++N VI C + + + F M+ PN T +L+ VY K + ++ F
Sbjct: 665 EMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLL 724
Query: 184 MRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGKL 363
+ ++ +Y+ +I Y + + + I ++ D ++ E + L++AY + ++
Sbjct: 725 AKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQM 784
Query: 364 QKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRSM 543
+K L M K+ P YN MI YG+ +D + L++ GL PD +Y ++
Sbjct: 785 EKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTL 844
Query: 544 IEGWG 558
I+ +G
Sbjct: 845 IKAYG 849
>emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|7269983|emb|CAB79800.1|
puative protein [Arabidopsis thaliana]
Length = 1075
Score = 263 bits (672), Expect = 1e-68
Identities = 125/186 (67%), Positives = 153/186 (82%)
Frame = +1
Query: 1 FQVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFS 180
+QVFNTVIYAC K+G ++ +KWF MML+ VRPNVATIGMLM +YQK V+EAEF FS
Sbjct: 381 YQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFS 440
Query: 181 QMRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGK 360
MR I+CESAYS+MITIYTRLRL+DKAEEVI L+K+D+V + ENWLV++NAY QQGK
Sbjct: 441 HMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK 500
Query: 361 LQKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRS 540
++ AE L+SM AGF P+I+AYNT+ITGYGK+F M+AAQ LF L +GL+PDET+YRS
Sbjct: 501 MELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRS 560
Query: 541 MIEGWG 558
MIEGWG
Sbjct: 561 MIEGWG 566
Score = 63.9 bits (154), Expect = 2e-08
Identities = 43/185 (23%), Positives = 86/185 (46%)
Frame = +1
Query: 4 QVFNTVIYACNKQGFAEIGAKWFRMMLDMRVRPNVATIGMLMSVYQKGLVVQEAEFTFSQ 183
+++N VI C + + + F M+ PN T +L+ VY K + ++ F
Sbjct: 836 EMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLL 895
Query: 184 MRSLKIMCESAYSAMITIYTRLRLHDKAEEVIGLLKEDKVIMNKENWLVLINAYCQQGKL 363
+ ++ +Y+ +I Y + + + I ++ D ++ E + L++AY + ++
Sbjct: 896 AKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQM 955
Query: 364 QKAELALISMHKAGFPPHIVAYNTMITGYGKVFDMDAAQSLFLNLEKVGLKPDETTYRSM 543
+K L M K+ P YN MI YG+ +D + L++ GL PD +Y ++
Sbjct: 956 EKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTL 1015
Query: 544 IEGWG 558
I+ +G
Sbjct: 1016 IKAYG 1020