BLASTX nr result

ID: Cnidium21_contig00045170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045170
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_003634846.1| PREDICTED: protein FRIGIDA-like [Vitis vinif...   124   1e-26
emb|CBI26735.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinif...   123   4e-26
ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]...   121   1e-25

>ref|XP_002302705.1| predicted protein [Populus trichocarpa] gi|222844431|gb|EEE81978.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  137 bits (346), Expect = 1e-30
 Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 1/213 (0%)
 Frame = +1

Query: 10  GFSSTNDFELRRSCVMFLEELMQLKTEIKGQAREKAMILAIDCKEMLNRITSINNNTXXX 189
           G   T    LRR+C+  LE L + K  +  +  E+A  LA++ K    R  S+N  +   
Sbjct: 196 GDKDTELCRLRRTCLDLLEALAKNKPTLSKEVNERAKKLALEWK----RKVSLNGESPLE 251

Query: 190 XXXXXXVAV-YGLRHAFSVDELMDYVVSVAKNKIAVQLCRLLDFGDNITGIIEKLISKGN 366
                 + V Y L   F V EL+DY V VA+ + AV LCR +D G+    +I+KLI  G 
Sbjct: 252 ALGFLHLLVAYNLEKEFDVGELVDYFVIVARFRQAVVLCRAVDLGEKTADLIQKLIDSGK 311

Query: 367 QLIAVKFIYEFEMTKQFPPVPLLEEYAKESKSLVQKIRMSGDINSQKMRDATLNELDKLK 546
           Q +AVKFI+EF +  +F PVPLL+ + KESK L +K+   G  +  +  +A   E+  LK
Sbjct: 312 QFLAVKFIFEFGLVDKFQPVPLLKAHLKESKRLTKKVCQDGKNSINQQNEARSREVKTLK 371

Query: 547 SVVKCIEDYKLASEFPKLNVLVQRIQKLEREKS 645
           S +  I++YKL SE+P+++ L +RI+ LE++K+
Sbjct: 372 SALVLIDEYKLGSEYPRMD-LKKRIEMLEKQKA 403


>ref|XP_003634846.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
           gi|147856913|emb|CAN80762.1| hypothetical protein
           VITISV_014605 [Vitis vinifera]
          Length = 545

 Score =  124 bits (312), Expect = 1e-26
 Identities = 75/229 (32%), Positives = 123/229 (53%), Gaps = 10/229 (4%)
 Frame = +1

Query: 4   MSGFSSTNDFELRRSCVMFLEELMQLKT--------EIKGQAREKAMILAIDCKEMLNR- 156
           + G    N   LRR+C+M +E L  L T        E+    +E A  +A + K  L+  
Sbjct: 230 LDGKKDANLLGLRRTCIMLMECLSILLTNPDLGPVSEVSDDVKEIAKAIAEEWKPKLDAL 289

Query: 157 -ITSINNNTXXXXXXXXXVAVYGLRHAFSVDELMDYVVSVAKNKIAVQLCRLLDFGDNIT 333
            I + N N+         +A +G+   F  +E+   +  V++ +    LCR L   + + 
Sbjct: 290 DIDASNGNSLEAHAFLQLLATFGIASDFDQEEISRLIPMVSRRRQTADLCRSLGLSEKMP 349

Query: 334 GIIEKLISKGNQLIAVKFIYEFEMTKQFPPVPLLEEYAKESKSLVQKIRMSGDINSQKMR 513
           G+IE LI+ G Q+ AV   + FE+T+QF PVPLL+ Y KE++     ++  G+ +     
Sbjct: 350 GVIEILINSGRQIDAVNLAFAFELTEQFSPVPLLKSYLKEARKASSPLK-PGNASPTAQN 408

Query: 514 DATLNELDKLKSVVKCIEDYKLASEFPKLNVLVQRIQKLEREKSNRKRA 660
           +    EL  LK+V+KCIED+KL  E+P L+ L +R+ +LE+ K+++KRA
Sbjct: 409 EVNERELTALKAVIKCIEDHKLEEEYP-LDPLQKRVVQLEKAKADKKRA 456


>emb|CBI26735.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  123 bits (309), Expect = 3e-26
 Identities = 71/208 (34%), Positives = 115/208 (55%)
 Frame = +1

Query: 37  LRRSCVMFLEELMQLKTEIKGQAREKAMILAIDCKEMLNRITSINNNTXXXXXXXXXVAV 216
           +RRSCV  LE+LM    EI    R++A  LA + K  +     + +NT         +A 
Sbjct: 61  MRRSCVFMLEQLMLFSPEIGEDVRQRAKSLAQEWKGKVK----VGDNTLKPMGFLHLLAA 116

Query: 217 YGLRHAFSVDELMDYVVSVAKNKIAVQLCRLLDFGDNITGIIEKLISKGNQLIAVKFIYE 396
           YGL   +   EL++ ++ V + +    LCR L+  D +  +I+ LI  G   +AVKF+ E
Sbjct: 117 YGLGSDYDSTELLELLIDVVRYREVFGLCRGLNLVDKVPDLIQNLIGSGKPNLAVKFVLE 176

Query: 397 FEMTKQFPPVPLLEEYAKESKSLVQKIRMSGDINSQKMRDATLNELDKLKSVVKCIEDYK 576
           F++T +FP + +L++  + S+ + +K+R  G  + Q + +AT  E+  LK V K I+DY 
Sbjct: 177 FKLTHKFPLIAILKDIVESSRDVARKVRKDGKHSLQSVNEATSKEISALKLVTKYIKDYD 236

Query: 577 LASEFPKLNVLVQRIQKLEREKSNRKRA 660
           L +E+P    L +RIQKLE + + R  A
Sbjct: 237 LNNEYPGA-PLEERIQKLESQMAARTAA 263


>ref|XP_002276345.1| PREDICTED: protein FRIGIDA-like [Vitis vinifera]
          Length = 533

 Score =  123 bits (308), Expect = 4e-26
 Identities = 71/208 (34%), Positives = 114/208 (54%)
 Frame = +1

Query: 37  LRRSCVMFLEELMQLKTEIKGQAREKAMILAIDCKEMLNRITSINNNTXXXXXXXXXVAV 216
           +RRSCV  LE+LM    EI    R++A  LA + K  +     + +NT         +A 
Sbjct: 209 MRRSCVFMLEQLMLFSPEIGEDVRQRAKSLAQEWKGKVK----VGDNTLKPMGFLHLLAA 264

Query: 217 YGLRHAFSVDELMDYVVSVAKNKIAVQLCRLLDFGDNITGIIEKLISKGNQLIAVKFIYE 396
           YGL   +   EL++ ++ V + +    LCR L+  D +  +I+ LI  G   +AVKF+ E
Sbjct: 265 YGLGSDYDSTELLELLIDVVRYREVFGLCRGLNLVDKVPDLIQNLIGSGKPNLAVKFVLE 324

Query: 397 FEMTKQFPPVPLLEEYAKESKSLVQKIRMSGDINSQKMRDATLNELDKLKSVVKCIEDYK 576
           F++T +FP + +L++  + S+ + +K+R  G  + Q   +AT  E+  LK V K I+DY 
Sbjct: 325 FKLTHKFPLIAILKDIVESSRDVARKVRKDGKHSLQSQNEATSKEISALKLVTKYIKDYD 384

Query: 577 LASEFPKLNVLVQRIQKLEREKSNRKRA 660
           L +E+P    L +RIQKLE + + R  A
Sbjct: 385 LNNEYPGA-PLEERIQKLESQMAARTAA 411


>ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]
           gi|223531527|gb|EEF33358.1| Protein FRIGIDA, putative
           [Ricinus communis]
          Length = 491

 Score =  121 bits (304), Expect = 1e-25
 Identities = 76/214 (35%), Positives = 127/214 (59%), Gaps = 4/214 (1%)
 Frame = +1

Query: 31  FELRRSCVMFLEELMQLKTEIK--GQAREKAMILAIDCKEMLNRITSINNNTXXXXXXXX 204
           + LR+SC+  LE L ++K + K   + + KA  LA + KE +    S+N ++        
Sbjct: 160 YRLRKSCLDLLEVLSEIKPKPKFSDEVKIKAKNLAFEWKEKV----SLNGDSPSEALGFL 215

Query: 205 XVAV-YGLRHAFS-VDELMDYVVSVAKNKIAVQLCRLLDFGDNITGIIEKLISKGNQLIA 378
            + V + L+  F  V+EL++Y V +A+ K A  L R +  GD I  +++KLI  G QL+A
Sbjct: 216 NLIVAFELKDMFDDVNELLNYFVVIARFKQATVLARDIGLGDKINDLVQKLIDSGKQLLA 275

Query: 379 VKFIYEFEMTKQFPPVPLLEEYAKESKSLVQKIRMSGDINSQKMRDATLNELDKLKSVVK 558
           VKFI+EF +T +F P PLL ++ KESK    K+      + +   +A   E++ LKSV++
Sbjct: 276 VKFIFEFGLTDKFQPAPLLRDHLKESKEFTDKVCKEEKNSVKAQNEARSREVNALKSVLR 335

Query: 559 CIEDYKLASEFPKLNVLVQRIQKLEREKSNRKRA 660
            I+++ L  ++P L+ L +RI+ LE++K++RK A
Sbjct: 336 YIDEHNLEFDYPHLD-LEKRIEMLEKQKADRKVA 368


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