BLASTX nr result

ID: Cnidium21_contig00045156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045156
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|NP_850924.1| uncharacterized protein [Arabidopsis thaliana] ...    69   3e-10
ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago ...    67   1e-09
ref|XP_002890512.1| hypothetical protein ARALYDRAFT_889749 [Arab...    67   2e-09
ref|XP_002512527.1| conserved hypothetical protein [Ricinus comm...    66   3e-09

>ref|XP_002316052.1| predicted protein [Populus trichocarpa] gi|222865092|gb|EEF02223.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
 Frame = +2

Query: 134 YWSAFRW----LTVDISSIFRWSELDISAWTRH----SIRWWSDLSIVDDVLWTLIWGVE 289
           Y S FRW     ++  SSI RW E D S +T      S+RW      +DDVLWT +  +E
Sbjct: 6   YPSIFRWPEFGFSMPSSSILRWPEFDFSYFTTRLTLESLRWLD--FAIDDVLWTFVTALE 63

Query: 290 SIALLAMLCCFFISCGCTV 346
           S+AL AMLC FF+ CGCT+
Sbjct: 64  SVALTAMLCYFFVFCGCTL 82


>ref|NP_850924.1| uncharacterized protein [Arabidopsis thaliana]
           gi|22530908|gb|AAM96958.1| unknown protein [Arabidopsis
           thaliana] gi|30102798|gb|AAP21317.1| At5g49525
           [Arabidopsis thaliana] gi|62319963|dbj|BAD94064.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|62320705|dbj|BAD95373.1| hypothetical protein
           [Arabidopsis thaliana] gi|332008442|gb|AED95825.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 80

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 10/79 (12%)
 Frame = +2

Query: 140 SAFRWLTVDISSI------FRWSELDISA----WTRHSIRWWSDLSIVDDVLWTLIWGVE 289
           SA RW  +D+ S       FRW E+++S+    W    +    DLSIVDD+LW+ +  +E
Sbjct: 2   SASRWTLMDLPSYLSSSWAFRWPEVNLSSLSSGWNMRLLSLSGDLSIVDDLLWSFVSIIE 61

Query: 290 SIALLAMLCCFFISCGCTV 346
           S+A+ A +CCFF+ CGCT+
Sbjct: 62  SLAITATVCCFFLFCGCTL 80


>ref|XP_003594699.1| hypothetical protein MTR_2g033600 [Medicago truncatula]
           gi|124361120|gb|ABN09092.1| hypothetical protein
           MtrDRAFT_AC173289g24v1 [Medicago truncatula]
           gi|355483747|gb|AES64950.1| hypothetical protein
           MTR_2g033600 [Medicago truncatula]
          Length = 85

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
 Frame = +2

Query: 140 SAFRWLTVDIS---SIFRWSELDISAWT------RHSIRWWSDLSIVDDVLWTLIWGVES 292
           S FRW  +D+S   S+FRW  L++S W          +RW  +  +VDDVLW L+  +ES
Sbjct: 10  SIFRWPELDLSFPWSVFRWPALNLSYWNVGRSFQETLLRW--NFWLVDDVLWELVRCIES 67

Query: 293 IALLAMLCCFFISCGCTV 346
           +ALL+++C +F+ CGCT+
Sbjct: 68  LALLSIICYYFLCCGCTL 85


>ref|XP_002890512.1| hypothetical protein ARALYDRAFT_889749 [Arabidopsis lyrata subsp.
           lyrata] gi|297336354|gb|EFH66771.1| hypothetical protein
           ARALYDRAFT_889749 [Arabidopsis lyrata subsp. lyrata]
          Length = 80

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
 Frame = +2

Query: 140 SAFRWLTVDISSI------FRWSELDIS----AWTRHSIRWWSDLSIVDDVLWTLIWGVE 289
           SA RW  +D+ S       FRW E+++S     W    +    +LSI+DD+LW+ +  VE
Sbjct: 2   SASRWTLMDLPSYLSSSWAFRWPEVNLSYLSSGWNMRLLSLSGNLSIIDDLLWSFVSIVE 61

Query: 290 SIALLAMLCCFFISCGCTV 346
           S+A++  +CCFF+ CGCT+
Sbjct: 62  SLAIVTTICCFFLFCGCTL 80


>ref|XP_002512527.1| conserved hypothetical protein [Ricinus communis]
           gi|223548488|gb|EEF49979.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
 Frame = +2

Query: 140 SAFRWLTVDIS-SIFRWSELDISAWTRHSIRWWS---DLSIVDDVLWTLIWGVESIALLA 307
           SA RWL VD + S+ RW +   S++   S RW     + SIVDDV+W LI   ES+AL++
Sbjct: 8   SALRWLGVDTAYSLLRWPQFMSSSYL--SPRWPELNLNFSIVDDVVWGLITAFESVALVS 65

Query: 308 MLCCFFISCGCTV 346
           MLC FF+ CGCT+
Sbjct: 66  MLCFFFLFCGCTI 78


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