BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045143
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002514722.1| pentatricopeptide repeat-containing protein,...    62   5e-08
ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-07
emb|CBI28530.3| unnamed protein product [Vitis vinifera]               58   9e-07

>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
           gi|449477571|ref|XP_004155060.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
          Length = 487

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = +3

Query: 3   FIKARELWDEAIAMGVDLQVSGDVLDPSVTEVFKPTRKVEDKICLVNHTKPKRNQA 170
           F   R+LW+EA+AMGV L  S ++LDPS+T+VFKPTRK+E+KI    ++  K+N+A
Sbjct: 419 FEMGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKA 474


>ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|222859274|gb|EEE96821.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = +3

Query: 3   FIKARELWDEAIAMGVDLQVSGDVLDPSVTEVFKPTRKVEDKICL 137
           F + RELW+EA AMGV    S DVLDPS+TEVFKP RKVE+ + L
Sbjct: 412 FERGRELWEEATAMGVSFSCSSDVLDPSITEVFKPRRKVEEDVKL 456


>ref|XP_002514722.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546326|gb|EEF47828.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 479

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/42 (64%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   FIKARELWDEAIAMGVDLQVSGDVLDPSVTEVFKPTRKVEDK 128
           F K +ELWDEA+AMGV +  S +VLDPS+T+VF+PTRKVE++
Sbjct: 395 FEKGKELWDEAMAMGVTVHCSSEVLDPSITKVFEPTRKVEEE 436


>ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Glycine max]
          Length = 451

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   FIKARELWDEAIAMGVDLQVSGDVLDPSVTEVFKPTR 113
           F K RELWDEA  MG+ LQ S DVLDPS+TEV+KPTR
Sbjct: 376 FEKGRELWDEASGMGITLQCSEDVLDPSITEVYKPTR 412


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = +3

Query: 3   FIKARELWDEAIAMGVDLQVSGDVLDPSVTEVFKPTRKVEDKICLVNHT 149
           F K RELWDEA  +GV L  S +VLDPS+T+VFKP RK ++++C ++ T
Sbjct: 378 FGKGRELWDEATRVGVLLHCSSEVLDPSITKVFKPARK-DEEVCTMSRT 425