BLASTX nr result

ID: Cnidium21_contig00045106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045106
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinif...   100   2e-19
ref|XP_003592786.1| Macrophage erythroblast attacher [Medicago t...    96   4e-18
ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit c...    95   7e-18
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]      94   1e-17

>ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinifera]
           gi|296087785|emb|CBI35041.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/60 (75%), Positives = 55/60 (91%)
 Frame = -2

Query: 180 AAAKQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKFAVFTWY 1
           +A +QVKL+KECELRVEVS ++ LRLRL+NGTAEIFGTE+PP++WLSFP  +KFAVFTWY
Sbjct: 5   SAIRQVKLEKECELRVEVSENAPLRLRLLNGTAEIFGTEIPPEIWLSFPPRLKFAVFTWY 64


>ref|XP_003592786.1| Macrophage erythroblast attacher [Medicago truncatula]
           gi|355481834|gb|AES63037.1| Macrophage erythroblast
           attacher [Medicago truncatula]
          Length = 873

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -2

Query: 171 KQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKFAVFTWY 1
           KQVKL+KECELR+EVS DS LRLRL+NG AEIFGTE+PP++WL+FP  +KFAVFTWY
Sbjct: 20  KQVKLEKECELRIEVS-DSPLRLRLLNGNAEIFGTELPPEIWLNFPPRLKFAVFTWY 75


>ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/60 (70%), Positives = 52/60 (86%)
 Frame = -2

Query: 180 AAAKQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKFAVFTWY 1
           +  +QVKL+KE ELR+EV+ D+ LRLRL+NGTAEIFGTE+PPQ+WL+FP   KFAVFTWY
Sbjct: 10  STTRQVKLEKESELRIEVANDTPLRLRLLNGTAEIFGTELPPQIWLTFPPHFKFAVFTWY 69


>ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit clp1p, putative [Ricinus
           communis] gi|223543478|gb|EEF45009.1|
           cleavage/polyadenylation factor ia subunit clp1p,
           putative [Ricinus communis]
          Length = 431

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/68 (64%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
 Frame = -2

Query: 201 GGVSCVMAAA-KQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFV 25
           GG +   A+  KQVKL++E ELR+EV+ D+ LRLRL+NGTAEIFGTE+PP++WL+FP  +
Sbjct: 4   GGAAMTAASTMKQVKLERESELRIEVANDTPLRLRLLNGTAEIFGTELPPEMWLTFPPRL 63

Query: 24  KFAVFTWY 1
           KFAVFTWY
Sbjct: 64  KFAVFTWY 71


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/66 (65%), Positives = 54/66 (81%)
 Frame = -2

Query: 198 GVSCVMAAAKQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKF 19
           G S   +  KQVKL++E ELR+EV  D+ LRLRL+NGTAEIFGTE+PP++WL+FP  +KF
Sbjct: 10  GGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIWLNFPPRLKF 69

Query: 18  AVFTWY 1
           AVFTWY
Sbjct: 70  AVFTWY 75


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