BLASTX nr result
ID: Cnidium21_contig00045106
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00045106 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinif... 100 2e-19 ref|XP_003592786.1| Macrophage erythroblast attacher [Medicago t... 96 4e-18 ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2... 96 4e-18 ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit c... 95 7e-18 ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max] 94 1e-17 >ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinifera] gi|296087785|emb|CBI35041.3| unnamed protein product [Vitis vinifera] Length = 427 Score = 100 bits (248), Expect = 2e-19 Identities = 45/60 (75%), Positives = 55/60 (91%) Frame = -2 Query: 180 AAAKQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKFAVFTWY 1 +A +QVKL+KECELRVEVS ++ LRLRL+NGTAEIFGTE+PP++WLSFP +KFAVFTWY Sbjct: 5 SAIRQVKLEKECELRVEVSENAPLRLRLLNGTAEIFGTEIPPEIWLSFPPRLKFAVFTWY 64 >ref|XP_003592786.1| Macrophage erythroblast attacher [Medicago truncatula] gi|355481834|gb|AES63037.1| Macrophage erythroblast attacher [Medicago truncatula] Length = 873 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/57 (77%), Positives = 52/57 (91%) Frame = -2 Query: 171 KQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKFAVFTWY 1 KQVKL+KECELR+EVS DS LRLRL+NG AEIFGTE+PP++WL+FP +KFAVFTWY Sbjct: 20 KQVKLEKECELRIEVS-DSPLRLRLLNGNAEIFGTELPPEIWLNFPPRLKFAVFTWY 75 >ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1| predicted protein [Populus trichocarpa] Length = 437 Score = 95.5 bits (236), Expect = 4e-18 Identities = 42/60 (70%), Positives = 52/60 (86%) Frame = -2 Query: 180 AAAKQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKFAVFTWY 1 + +QVKL+KE ELR+EV+ D+ LRLRL+NGTAEIFGTE+PPQ+WL+FP KFAVFTWY Sbjct: 10 STTRQVKLEKESELRIEVANDTPLRLRLLNGTAEIFGTELPPQIWLTFPPHFKFAVFTWY 69 >ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit clp1p, putative [Ricinus communis] gi|223543478|gb|EEF45009.1| cleavage/polyadenylation factor ia subunit clp1p, putative [Ricinus communis] Length = 431 Score = 94.7 bits (234), Expect = 7e-18 Identities = 44/68 (64%), Positives = 57/68 (83%), Gaps = 1/68 (1%) Frame = -2 Query: 201 GGVSCVMAAA-KQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFV 25 GG + A+ KQVKL++E ELR+EV+ D+ LRLRL+NGTAEIFGTE+PP++WL+FP + Sbjct: 4 GGAAMTAASTMKQVKLERESELRIEVANDTPLRLRLLNGTAEIFGTELPPEMWLTFPPRL 63 Query: 24 KFAVFTWY 1 KFAVFTWY Sbjct: 64 KFAVFTWY 71 >ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max] Length = 438 Score = 94.0 bits (232), Expect = 1e-17 Identities = 43/66 (65%), Positives = 54/66 (81%) Frame = -2 Query: 198 GVSCVMAAAKQVKLDKECELRVEVSPDSSLRLRLVNGTAEIFGTEMPPQVWLSFPSFVKF 19 G S + KQVKL++E ELR+EV D+ LRLRL+NGTAEIFGTE+PP++WL+FP +KF Sbjct: 10 GGSGSASTIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIWLNFPPRLKF 69 Query: 18 AVFTWY 1 AVFTWY Sbjct: 70 AVFTWY 75