BLASTX nr result
ID: Cnidium21_contig00045069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00045069
(304 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana] 83 3e-14
gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana] 83 3e-14
ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana] ... 83 3e-14
emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protei... 83 3e-14
ref|XP_002319940.1| predicted protein [Populus trichocarpa] gi|2... 81 8e-14
>gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 82.8 bits (203), Expect = 3e-14
Identities = 42/101 (41%), Positives = 66/101 (65%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+QG F G AQ FKE M++ G+ N++T NT+LDGL KN +++AM F +Q +
Sbjct: 233 IQGLFQAGDCDMAQEIFKE--MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
+ P I+TYNI+I+G+CK G + ++F +L KG++P+V
Sbjct: 291 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331
Score = 75.5 bits (184), Expect = 4e-12
Identities = 40/101 (39%), Positives = 57/101 (56%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
++GF R E F+E M +GL N VT N ++ GLF+ + D A F M +
Sbjct: 198 IKGFCKYKRVEEGMEVFRE--MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 255
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
G+PP+I TYN L+DGLCKNG +KA +F+ L + P +
Sbjct: 256 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296
Score = 61.6 bits (148), Expect = 6e-08
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 64 MLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCNGLPPHIHTYNILIDGLCKNGN 243
M+ KG + ++VT +++GL K + D A + + M+ L P + YN +IDGLCK +
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 244 FQKAKNIFDSLPSKGLRPNV 303
A N+F + +KG+RPNV
Sbjct: 67 MDDALNLFKEMETKGIRPNV 86
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ GF + R EA+ F+ M++K ++VT NT++ G K + ++E M F M
Sbjct: 163 INGFCMHDRLDEAKQMFE--FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 220
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
GL + TYNILI GL + G+ A+ IF + S G+ PN+
Sbjct: 221 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 261
>gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 82.8 bits (203), Expect = 3e-14
Identities = 42/101 (41%), Positives = 66/101 (65%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+QG F G AQ FKE M++ G+ N++T NT+LDGL KN +++AM F +Q +
Sbjct: 1052 IQGLFQAGDCDMAQEIFKE--MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
+ P I+TYNI+I+G+CK G + ++F +L KG++P+V
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 1150
Score = 75.5 bits (184), Expect = 4e-12
Identities = 40/101 (39%), Positives = 57/101 (56%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
++GF R E F+E M +GL N VT N ++ GLF+ + D A F M +
Sbjct: 1017 IKGFCKYKRVEEGMEVFRE--MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 1074
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
G+PP+I TYN L+DGLCKNG +KA +F+ L + P +
Sbjct: 1075 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 1115
Score = 70.9 bits (172), Expect = 1e-10
Identities = 37/95 (38%), Positives = 53/95 (55%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ GF R + F+E M +GL N VT NT++ G F+ ++D+A FF M
Sbjct: 440 INGFCKAKRVEDGMKLFRE--MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 497
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSK 285
G+ P I TYNIL+ GLC NG +KA IF+ + +
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Score = 64.3 bits (155), Expect = 1e-08
Identities = 35/101 (34%), Positives = 55/101 (54%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ G FL + EA M+ KG + ++VT +++GL K + D A + + M+
Sbjct: 807 IHGLFLHNKASEAMALIDR--MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 864
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
L P + YN +IDGLCK + A N+F + +KG+RPNV
Sbjct: 865 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905
Score = 63.5 bits (153), Expect = 2e-08
Identities = 36/101 (35%), Positives = 57/101 (56%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+QGFF G +AQ FF + G+ ++ T N +L GL N +++A+ F MQ
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFF--GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
+ I TY +I G+CK G ++A ++F SL KGL+P++
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 573
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ GF + R EA+ F+ M++K ++VT NT++ G K + ++E M F M
Sbjct: 982 INGFCMHDRLDEAKQMFE--FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 1039
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
GL + TYNILI GL + G+ A+ IF + S G+ PN+
Sbjct: 1040 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 1080
Score = 57.8 bits (138), Expect = 9e-07
Identities = 32/101 (31%), Positives = 53/101 (52%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ G L R EA F LM++KG ++V+ NT+++G K + +++ M F M
Sbjct: 405 INGLCLHDRIDEANQMFD--LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
GL + TYN LI G + G+ KA+ F + G+ P++
Sbjct: 463 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +1
Query: 64 MLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCNGLPPHIHTYNILIDGLCKNGN 243
M G + N VT NT++ GLF + EAM+ M G P + TY ++++GLCK G+
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850
Query: 244 FQKAKNIFDSLPSKGLRPNV 303
A N+ + + L P V
Sbjct: 851 TDLAFNLLNKMEQGKLEPGV 870
Score = 55.5 bits (132), Expect = 5e-06
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 64 MLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCNGLPPHIHTYNILIDGLCKNGN 243
M+ G K ++V N ++D L K + +++A FF ++ G+ P++ TY L++GLC +
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 244 FQKAKNIFDSLPSKGLRPNV 303
+ A + + K + PNV
Sbjct: 344 WSDAARLLSDMIKKKITPNV 363
>ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2
[Arabidopsis thaliana]
Length = 630
Score = 82.8 bits (203), Expect = 3e-14
Identities = 42/101 (41%), Positives = 66/101 (65%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+QG F G AQ FKE M++ G+ N++T NT+LDGL KN +++AM F +Q +
Sbjct: 438 IQGLFQAGDCDMAQEIFKE--MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
+ P I+TYNI+I+G+CK G + ++F +L KG++P+V
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Score = 75.5 bits (184), Expect = 4e-12
Identities = 40/101 (39%), Positives = 57/101 (56%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
++GF R E F+E M +GL N VT N ++ GLF+ + D A F M +
Sbjct: 403 IKGFCKYKRVEEGMEVFRE--MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
G+PP+I TYN L+DGLCKNG +KA +F+ L + P +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Score = 64.3 bits (155), Expect = 1e-08
Identities = 35/101 (34%), Positives = 55/101 (54%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ G FL + EA M+ KG + ++VT +++GL K + D A + + M+
Sbjct: 193 IHGLFLHNKASEAMALIDR--MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
L P + YN +IDGLCK + A N+F + +KG+RPNV
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ GF + R EA+ F+ M++K ++VT NT++ G K + ++E M F M
Sbjct: 368 INGFCMHDRLDEAKQMFE--FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
GL + TYNILI GL + G+ A+ IF + S G+ PN+
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +1
Query: 64 MLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCNGLPPHIHTYNILIDGLCKNGN 243
M G + N VT NT++ GLF + EAM+ M G P + TY ++++GLCK G+
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 244 FQKAKNIFDSLPSKGLRPNV 303
A N+ + + L P V
Sbjct: 237 TDLAFNLLNKMEQGKLEPGV 256
>emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 82.8 bits (203), Expect = 3e-14
Identities = 42/101 (41%), Positives = 66/101 (65%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+QG F G AQ FKE M++ G+ N++T NT+LDGL KN +++AM F +Q +
Sbjct: 438 IQGLFQAGDCDMAQEIFKE--MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
+ P I+TYNI+I+G+CK G + ++F +L KG++P+V
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/101 (39%), Positives = 57/101 (56%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
++GF R E F+E M +GL N VT T++ GLF+ + D A F M +
Sbjct: 403 IKGFCKAKRVDEGMELFRE--MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
G+PP+I TYN L+DGLCKNG +KA +F+ L + P +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Score = 63.2 bits (152), Expect = 2e-08
Identities = 35/101 (34%), Positives = 54/101 (53%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ G FL + EA M+ KG + ++VT +++GL K + D A + M+
Sbjct: 193 IHGLFLHNKASEAVALIDR--MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQG 250
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
L P + Y +IDGLCKN + A N+F + +KG+RPNV
Sbjct: 251 KLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291
Score = 55.8 bits (133), Expect = 3e-06
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +1
Query: 61 LMLNK----GLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCNGLPPHIHTYNILIDGL 228
++LNK L+ ++ T++DGL KN++MD+A++ F M+ G+ P++ TY+ LI L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 229 CKNGNFQKAKNIFDSLPSKGLRPNV 303
C G + A + + + + P+V
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDV 326
Score = 55.8 bits (133), Expect = 3e-06
Identities = 33/101 (32%), Positives = 54/101 (53%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ GF + R EA+ F+ M++K ++V+ +T++ G K + +DE M F M
Sbjct: 368 INGFCMHDRLDEAKQMFE--FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
GL + TY LI GL + G+ A+ IF + S G+ PN+
Sbjct: 426 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
>ref|XP_002319940.1| predicted protein [Populus trichocarpa] gi|222858316|gb|EEE95863.1|
predicted protein [Populus trichocarpa]
Length = 555
Score = 81.3 bits (199), Expect = 8e-14
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ G R +EA+ FK+ M + G N+VT + +LD L K +D+AM F M+ +
Sbjct: 413 ISGLCQARRPLEAEELFKD--MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENS 470
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPN 300
GL P + TYNI+IDG+CK G F+ A+ +F L KGL+PN
Sbjct: 471 GLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510
Score = 63.9 bits (154), Expect = 1e-08
Identities = 36/101 (35%), Positives = 58/101 (57%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ G+ R EA+ F E M ++GL + V+ NT++ GL + R EA F M N
Sbjct: 378 VNGYCKAKRIDEAKQLFDE--MTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSN 435
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
G PP++ TY+IL+D L K G +A +F ++ + GL+P++
Sbjct: 436 GYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476
Score = 55.1 bits (131), Expect = 6e-06
Identities = 32/101 (31%), Positives = 55/101 (54%)
Frame = +1
Query: 1 LQGFFLTGRHVEAQNFFKEKLMLNKGLKINMVTCNTMLDGLFKNRNMDEAMSFFHLMQCN 180
+ G+ L VEA+ F+ +M++KG ++ + + +++G K + +DEA F M
Sbjct: 343 MNGYCLRMEVVEARKVFE--VMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR 400
Query: 181 GLPPHIHTYNILIDGLCKNGNFQKAKNIFDSLPSKGLRPNV 303
GL P +YN LI GLC+ +A+ +F + S G PN+
Sbjct: 401 GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNL 441