BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045061
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis] g...    98   6e-19
ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi...    94   9e-18
dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]         94   9e-18
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554...    94   9e-18
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]     90   2e-16

>ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
           gi|223532899|gb|EEF34668.1| DNA ligase IV, putative
           [Ricinus communis]
          Length = 850

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/72 (66%), Positives = 52/72 (72%)
 Frame = +3

Query: 60  SSTKFNVMCSLFNWMQXXXXXXXXXXXXXXXLDNFCKPSDYFSAIRLILPSLDRERGSYG 239
           + TKF+VM SLF W+Q               LD FCKP DYFSAIRLILPSLDRERGSYG
Sbjct: 4   NETKFSVMVSLFEWIQKSKYSAKKRSKFRKFLDTFCKPDDYFSAIRLILPSLDRERGSYG 63

Query: 240 LKESVLATCLID 275
           LKESVLATCL+D
Sbjct: 64  LKESVLATCLVD 75


>ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
           gi|297312022|gb|EFH42446.1| ATLIG4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1221

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/69 (65%), Positives = 51/69 (73%)
 Frame = +3

Query: 69  KFNVMCSLFNWMQXXXXXXXXXXXXXXXLDNFCKPSDYFSAIRLILPSLDRERGSYGLKE 248
           KF+V+ SLFNW+Q               LD +CKPSDYF A+RLI+PSLDRERGSYGLKE
Sbjct: 6   KFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSYGLKE 65

Query: 249 SVLATCLID 275
           SVLATCLID
Sbjct: 66  SVLATCLID 74


>dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1184

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/69 (65%), Positives = 51/69 (73%)
 Frame = +3

Query: 69  KFNVMCSLFNWMQXXXXXXXXXXXXXXXLDNFCKPSDYFSAIRLILPSLDRERGSYGLKE 248
           KF+V+ SLFNW+Q               LD +CKPSDYF A+RLI+PSLDRERGSYGLKE
Sbjct: 6   KFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSYGLKE 65

Query: 249 SVLATCLID 275
           SVLATCLID
Sbjct: 66  SVLATCLID 74


>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
           gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
           ligase 4; AltName: Full=DNA ligase IV; AltName:
           Full=Polydeoxyribonucleotide synthase [ATP] 4
           gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
           [Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
           ligase 4 [Arabidopsis thaliana]
          Length = 1219

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/69 (65%), Positives = 51/69 (73%)
 Frame = +3

Query: 69  KFNVMCSLFNWMQXXXXXXXXXXXXXXXLDNFCKPSDYFSAIRLILPSLDRERGSYGLKE 248
           KF+V+ SLFNW+Q               LD +CKPSDYF A+RLI+PSLDRERGSYGLKE
Sbjct: 6   KFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSYGLKE 65

Query: 249 SVLATCLID 275
           SVLATCLID
Sbjct: 66  SVLATCLID 74


>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
          Length = 1214

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/69 (65%), Positives = 49/69 (71%)
 Frame = +3

Query: 69  KFNVMCSLFNWMQXXXXXXXXXXXXXXXLDNFCKPSDYFSAIRLILPSLDRERGSYGLKE 248
           KF V+ SLF+W+Q               LD FC PS YFSAIRLILPSLDRERG+YGLKE
Sbjct: 6   KFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCSPSHYFSAIRLILPSLDRERGTYGLKE 65

Query: 249 SVLATCLID 275
           SVLATCLID
Sbjct: 66  SVLATCLID 74