BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045051
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
emb|CBI24302.3| unnamed protein product [Vitis vinifera]              173   1e-41
emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]   172   3e-41
ref|XP_003593569.1| Pentatricopeptide repeat-containing protein ...   156   1e-36

>ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform 1 [Cucumis sativus]
           gi|449442523|ref|XP_004139031.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like isoform 2 [Cucumis sativus]
          Length = 517

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/129 (65%), Positives = 106/129 (82%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWTTM+GG+ Q G  E AVRVFQ MV  GE  PNEAT+V++LSACSSI  L+LG+WVH Y
Sbjct: 229 SWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSY 288

Query: 209 VSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYGKH 30
           ++SR D++++ NVGNAL+N+YVKCGNM++AI +F+ I+ KD+VSWST+ISGLAMNG GK 
Sbjct: 289 INSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQ 348

Query: 29  VLPLFSLML 3
              LFSLML
Sbjct: 349 AFVLFSLML 357



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWT+++ G  + GF + A+  F  M     V PN  T+V+ LSACSS+  L LG+ +H  
Sbjct: 131 SWTSIISGLSKLGFEKEALSKFLSM----NVRPNSTTLVTALSACSSLRCLKLGKAIH-- 184

Query: 209 VSSRDDLVMNRNV--GNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYG 36
              R   +   NV   NAL++ YV+C  +  A  +F  +  +DVVSW+TMI G A +G  
Sbjct: 185 -GLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLC 243

Query: 35  KHVLPLFSLML 3
           +  + +F  M+
Sbjct: 244 EEAVRVFQNMV 254


>ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like, partial [Cucumis sativus]
          Length = 472

 Score =  179 bits (453), Expect = 3e-43
 Identities = 83/129 (64%), Positives = 105/129 (81%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWTTM+GG+ Q G  E AVRVFQ MV  GE  PNEAT+V++LSACSSI  L+LG+WVH Y
Sbjct: 184 SWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSY 243

Query: 209 VSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYGKH 30
           ++SR D++++ NVGNAL+N+YVKCGNM++AI +F+  + KD+VSWST+ISGLAMNG GK 
Sbjct: 244 INSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDIVSWSTIISGLAMNGLGKQ 303

Query: 29  VLPLFSLML 3
              LFSLML
Sbjct: 304 AFVLFSLML 312



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWT+++ G  + GF + A+  F  M     V PN  T+V+ LS CSS+  L LG+ +H  
Sbjct: 86  SWTSIISGLSKLGFEKEALSKFLSM----NVRPNSTTLVTALSTCSSLRCLKLGKAIH-- 139

Query: 209 VSSRDDLVMNRNV--GNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYG 36
              R   +   NV   NAL++ YV+C  +  A  +F  +  +DVVSW+TMI G A +G  
Sbjct: 140 -GLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLC 198

Query: 35  KHVLPLFSLML 3
           +  + +F  M+
Sbjct: 199 EEAVRVFQNMV 209


>emb|CBI24302.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  173 bits (438), Expect = 1e-41
 Identities = 80/129 (62%), Positives = 101/129 (78%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWTTMVGG  Q G  E AV VFQ MV+GGE  PNE T+V++L+ACSS+  LNLGRWVH Y
Sbjct: 242 SWTTMVGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLGRWVHSY 301

Query: 209 VSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYGKH 30
           +S+R DLV++ NVGNAL+N+Y KC +M +A+RVF  +  KD++SWST+I G+AMNG+G H
Sbjct: 302 ISTRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDMISWSTIIGGMAMNGHGMH 361

Query: 29  VLPLFSLML 3
            L  FSLML
Sbjct: 362 ALQFFSLML 370



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/129 (36%), Positives = 76/129 (58%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWT+++ G  + GF E A+  F  M    +V+PN +T+VS++SAC  +  +  G+ +H Y
Sbjct: 144 SWTSIISGLSKCGFDEEAIGEFLSM----DVKPNTSTLVSVVSACCGLRAVRFGKAIHGY 199

Query: 209 VSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYGKH 30
            S R     N  + NAL++ YVKCG +  A  +F  +  +DV+SW+TM+ GLA  G  + 
Sbjct: 200 -SLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDVISWTTMVGGLAQGGLCEE 258

Query: 29  VLPLFSLML 3
            + +F  M+
Sbjct: 259 AVEVFQAMV 267


>emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]
          Length = 725

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/129 (62%), Positives = 100/129 (77%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWTTMVGG  Q G  E AV VFQ MV+GGE  PNE T+V++L+ACSS+  LNLGRWVH Y
Sbjct: 176 SWTTMVGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLGRWVHSY 235

Query: 209 VSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYGKH 30
           +S R DLV++ NVGNAL+N+Y KC +M +A+RVF  +  KD++SWST+I G+AMNG+G H
Sbjct: 236 ISIRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDMISWSTIIGGMAMNGHGMH 295

Query: 29  VLPLFSLML 3
            L  FSLML
Sbjct: 296 ALQFFSLML 304



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/129 (36%), Positives = 76/129 (58%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWT+++ G  + GF E A+  F  M    +V+PN +T+VS++SAC  +  +  G+ +H Y
Sbjct: 78  SWTSIISGLSKCGFDEEAIGEFLSM----DVKPNTSTLVSVVSACCGLRAVRFGKAIHGY 133

Query: 209 VSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYGKH 30
            S R     N  + NAL++ YVKCG +  A  +F  +  +DV+SW+TM+ GLA  G  + 
Sbjct: 134 -SLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDVISWTTMVGGLAQGGLCEE 192

Query: 29  VLPLFSLML 3
            + +F  M+
Sbjct: 193 AVEVFQAMV 201


>ref|XP_003593569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482617|gb|AES63820.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 528

 Score =  156 bits (395), Expect = 1e-36
 Identities = 72/129 (55%), Positives = 99/129 (76%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWTT++  + + G    AV VF++M+  GE EPNE+TVV++LSAC+SIG L+LG WVH Y
Sbjct: 225 SWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDY 284

Query: 209 VSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYGKH 30
           +  R DL ++ N+GNALVN+YVKCG+M + ++VF ++  KDV+SW T+I GLAMNGYGK 
Sbjct: 285 IEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQ 344

Query: 29  VLPLFSLML 3
           V+ +FS ML
Sbjct: 345 VVQMFSHML 353



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
 Frame = -1

Query: 389 SWTTMVGGFVQRGFFEVAVRVFQEMVQGGEVEPNEATVVSMLSACSSIGDLNLGRWVHCY 210
           SWT+++ G  + GF   A+  F  +     V+PN  T+VS +SACSSIG +  G+ +H Y
Sbjct: 126 SWTSLISGLSKCGFETEAIEAFSSI----NVKPNALTLVSAISACSSIGAIKFGKAIHAY 181

Query: 209 VSSRDDLVMNRNVG--NALVNLYVKCGNMDLAIRVFRVIKFKDVVSWSTMISGLAMNGYG 36
                 L+++ N+   NA ++LY KCG    A  VF  +  +DV+SW+T++   A  G  
Sbjct: 182 --GLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQC 239

Query: 35  KHVLPLFSLML 3
              + +F  M+
Sbjct: 240 GEAVEVFKQMI 250