BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045049
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    65   4e-09
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    62   6e-08
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    57   1e-06
ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...    55   5e-06

>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
 Frame = -1

Query: 335 VSKEWCSIIDSPAFVKKHLKNSIKCNPNGDGVFITGAQYCLTHLDSLYDAN-DA--TVIS 165
           +SK WC+ ID P F+K HLK S + N N   +F        +H D  Y+ N D+  ++I 
Sbjct: 28  ISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIFAG------SHPDYFYNVNLDSLNSIIK 81

Query: 164 LDDTLKDVLSGAH---FVGAANCLVCFCKNKMNEFLLLNPSTRKYRKIPRL 21
           L++ +K     +H    VG+ N L+CF  N      L+NPSTRK++ +P L
Sbjct: 82  LENPIKGPTDASHNIKIVGSCNGLLCF-GNASGRITLMNPSTRKHKVLPFL 131


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = -1

Query: 335 VSKEWCSIIDSPAFVKKHLKNSIKCNPNGDGVFITGAQYCLTHLDSLYDAND-ATVISLD 159
           VSK WC++ID P FVK HLK+S+  + N   +  T +       +     ND  T+  L+
Sbjct: 27  VSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVHYMDFEQNLVLNDCVTLKELN 86

Query: 158 DTLKDVLSGAHFVGAANCLVCFCKNKMNEFLLLNPSTRKYRKIPRLP 18
             L     G   +G+ N L+C   N +++  + NPSTRK+R +P LP
Sbjct: 87  HPLMCYNHGIKVLGSVNGLLCI-SNVVDDIAVWNPSTRKHRVVPFLP 132


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/106 (34%), Positives = 55/106 (51%)
 Frame = -1

Query: 335 VSKEWCSIIDSPAFVKKHLKNSIKCNPNGDGVFITGAQYCLTHLDSLYDANDATVISLDD 156
           VSK W ++IDSP F+  HL +SI+   N   +  +   Y L+     +D  D  +  LD 
Sbjct: 27  VSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILKSSELYSLS-----FDLLD-NIQPLDH 80

Query: 155 TLKDVLSGAHFVGAANCLVCFCKNKMNEFLLLNPSTRKYRKIPRLP 18
            L     G   +G+ N L+C C N +++  L NPS R +R +P LP
Sbjct: 81  PLMCYNHGVKILGSCNGLLCIC-NIVDDIALWNPSIRAHRVVPYLP 125


>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
 Frame = -1

Query: 335 VSKEWCSIIDSPAFVKKHLKNSIKCNPNGDGVFI------TGAQYCLTHLDSLYDANDAT 174
           +SK +C++ID+P F+K HL  SI+  P    + +          Y   H   L D     
Sbjct: 27  ISKSYCTLIDNPDFIKAHLDTSIQTKPRKKLILLRHQSNGVAEFYAADHNGGLIDP---- 82

Query: 173 VISLDDTLKDVLSGAHFVGAANCLVCFCKNKMNEFLLLNPSTRKYRKIPRLPRK 12
            I L   +K   +G   VG+ N LV   +N  ++ LL NP T +Y+ +P   R+
Sbjct: 83  -IKLKSPIKSKSNGTRIVGSCNSLVLLMQN-TDKLLLWNPFTTQYKILPEPQRE 134