BLASTX nr result

ID: Cnidium21_contig00045007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045007
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    192   3e-47
gb|ABG37658.1| integrase [Populus trichocarpa]                        184   7e-45
gb|ACY01934.1| hypothetical protein [Beta vulgaris]                   183   1e-44
ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259...   181   7e-44
emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]   181   7e-44

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/133 (69%), Positives = 106/133 (79%)
 Frame = -1

Query: 399  KILMEEGAKESVEGQRRLNPIMXXXXXXXXXKWLDAGIIYPISDSSWVSHVQCVPKKGGL 220
            +I + + AK + + QRRLNP+M         K LD GIIYPISDSSWVS VQ VPKK G+
Sbjct: 824  RIHLIDDAKPTRDAQRRLNPVMKEAVRKDILKCLDHGIIYPISDSSWVSPVQVVPKKSGI 883

Query: 219  TVIKNEDNELIPTRTVTGWRICIDYRKLNKSTRKDHFPLPFIDQMLDRLAEREYYCFLDG 40
            TVI+NE NELIPTR  TGWR+CIDYRKLN +TRKDHFPLPFIDQML+RLA  E+YCFLDG
Sbjct: 884  TVIQNEANELIPTRIQTGWRVCIDYRKLNLATRKDHFPLPFIDQMLERLAGHEFYCFLDG 943

Query: 39   YSGYNQITVAPED 1
            YSGYNQI +APED
Sbjct: 944  YSGYNQIPIAPED 956


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  184 bits (467), Expect = 7e-45
 Identities = 90/129 (69%), Positives = 100/129 (77%)
 Frame = -1

Query: 387 EEGAKESVEGQRRLNPIMXXXXXXXXXKWLDAGIIYPISDSSWVSHVQCVPKKGGLTVIK 208
           +E AK S E QRRLNP M         K LD GIIYPISDS WVS  Q VPKK G+TVI 
Sbjct: 321 QENAKPSREMQRRLNPNMKEVVKNEVIKLLDNGIIYPISDSKWVSPTQVVPKKSGVTVIT 380

Query: 207 NEDNELIPTRTVTGWRICIDYRKLNKSTRKDHFPLPFIDQMLDRLAEREYYCFLDGYSGY 28
           NE NELIPTRT+TGWR+CIDYRKLN  TRKDHFPLPF+DQ+L+R+A  E+YCFLDGYSGY
Sbjct: 381 NEKNELIPTRTITGWRMCIDYRKLNSMTRKDHFPLPFMDQILERVAGHEFYCFLDGYSGY 440

Query: 27  NQITVAPED 1
           NQI +A ED
Sbjct: 441 NQIEIALED 449


>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/133 (66%), Positives = 104/133 (78%)
 Frame = -1

Query: 399  KILMEEGAKESVEGQRRLNPIMXXXXXXXXXKWLDAGIIYPISDSSWVSHVQCVPKKGGL 220
            KI +E+  + S++GQRRLNP M         K LDAGIIYPISDS WVS VQ VPKKGG 
Sbjct: 865  KIHLEDDHRPSIQGQRRLNPNMQEVVKKEVMKLLDAGIIYPISDSKWVSPVQVVPKKGGT 924

Query: 219  TVIKNEDNELIPTRTVTGWRICIDYRKLNKSTRKDHFPLPFIDQMLDRLAEREYYCFLDG 40
            TV+KNE NELI TR VTGWR+CIDYRKLN +T+KDHFPLPFIDQML+RLA   ++C+LDG
Sbjct: 925  TVVKNEKNELIATRVVTGWRMCIDYRKLNVATKKDHFPLPFIDQMLERLACHSHFCYLDG 984

Query: 39   YSGYNQITVAPED 1
            YSG+ QI + P+D
Sbjct: 985  YSGFFQIPIHPDD 997


>ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259900 [Vitis vinifera]
          Length = 1409

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/132 (65%), Positives = 102/132 (77%)
 Frame = -1

Query: 396  ILMEEGAKESVEGQRRLNPIMXXXXXXXXXKWLDAGIIYPISDSSWVSHVQCVPKKGGLT 217
            I +EE AK   + QRRLNP+M         K LDAGIIYPISDSSWVS  Q VPKK G+T
Sbjct: 865  IYLEENAKPVRQPQRRLNPLMQDVVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGIT 924

Query: 216  VIKNEDNELIPTRTVTGWRICIDYRKLNKSTRKDHFPLPFIDQMLDRLAEREYYCFLDGY 37
            V+KN++ ELIPTR  TGWR+CID+RKLN  T+KDHFPLPF+DQ+L+R+A  +YYCFLDGY
Sbjct: 925  VMKNDEGELIPTRLTTGWRVCIDFRKLNAVTKKDHFPLPFLDQVLERVAGHDYYCFLDGY 984

Query: 36   SGYNQITVAPED 1
            SGY QI +A ED
Sbjct: 985  SGYFQIAIALED 996


>emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]
          Length = 2377

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/132 (65%), Positives = 102/132 (77%)
 Frame = -1

Query: 396  ILMEEGAKESVEGQRRLNPIMXXXXXXXXXKWLDAGIIYPISDSSWVSHVQCVPKKGGLT 217
            I +EE AK   + QRRLNP+M         K LDAGIIYPISDSSWVS  Q VPKK G+T
Sbjct: 873  IYLEENAKPVRQPQRRLNPLMQDVVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGIT 932

Query: 216  VIKNEDNELIPTRTVTGWRICIDYRKLNKSTRKDHFPLPFIDQMLDRLAEREYYCFLDGY 37
            V+KN++ ELIPTR  TGWR+CID+RKLN  T+KDHFPLPF+DQ+L+R+A  +YYCFLDGY
Sbjct: 933  VMKNDEGELIPTRLTTGWRVCIDFRKLNAVTKKDHFPLPFLDQVLERVAGHDYYCFLDGY 992

Query: 36   SGYNQITVAPED 1
            SGY QI +A ED
Sbjct: 993  SGYFQIAIALED 1004


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