BLASTX nr result

ID: Cnidium21_contig00044994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044994
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_176640.1| putative short-chain dehydrogenase [Arabidopsis...   228   4e-58
ref|XP_002887872.1| short-chain dehydrogenase/reductase family p...   228   5e-58
ref|NP_194136.1| Rossmann-fold NAD(P)-binding domain-containing ...   226   2e-57
ref|XP_002869743.1| short-chain dehydrogenase/reductase family p...   225   4e-57
ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32,...   223   2e-56

>ref|NP_176640.1| putative short-chain dehydrogenase [Arabidopsis thaliana]
           gi|6633817|gb|AAF19676.1|AC009519_10 F1N19.16
           [Arabidopsis thaliana] gi|15081624|gb|AAK82467.1|
           At1g64590/F1N19_15 [Arabidopsis thaliana]
           gi|27764968|gb|AAO23605.1| At1g64590/F1N19_15
           [Arabidopsis thaliana] gi|332196137|gb|AEE34258.1|
           putative short-chain dehydrogenase [Arabidopsis
           thaliana]
          Length = 334

 Score =  228 bits (582), Expect = 4e-58
 Identities = 113/147 (76%), Positives = 133/147 (90%)
 Frame = -3

Query: 441 MLDTVKYLLGWKGPSGYGSKSTADQVTASVDLRSSTAIITGATSGIGAETARVLAKRGAR 262
           M++TVK+L+G  GPSG+GS+STAD VT + DLRS TAIITGATSGIGAETARVLAKRGAR
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGAR 60

Query: 261 LVLPARNKKAAEETKARIQSEFPGAEVLIMQLDLSSLSSVRNFVKEFESLDLPLNLLINN 82
           LVLPAR+ K AEETKARI SEFP AE+++M LDLSSL+SVR FV +FESL+LPLN+LINN
Sbjct: 61  LVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINN 120

Query: 81  AGKFSHNHAVSEDGIEMTFATNFLGHF 1
           AGK++H HA+SEDG+EMTFATN+LGHF
Sbjct: 121 AGKYAHKHALSEDGVEMTFATNYLGHF 147


>ref|XP_002887872.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297333713|gb|EFH64131.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  228 bits (581), Expect = 5e-58
 Identities = 112/147 (76%), Positives = 133/147 (90%)
 Frame = -3

Query: 441 MLDTVKYLLGWKGPSGYGSKSTADQVTASVDLRSSTAIITGATSGIGAETARVLAKRGAR 262
           M++TVK+L+G  GPSG+GS+STAD VT + DLRS TAIITGATSGIGAETARVLAKRGAR
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGAR 60

Query: 261 LVLPARNKKAAEETKARIQSEFPGAEVLIMQLDLSSLSSVRNFVKEFESLDLPLNLLINN 82
           LVLPAR+ K AEETKARI +EFP AE+++M LDLSSL+SVR FV +FESL+LPLN+LINN
Sbjct: 61  LVLPARSVKTAEETKARILAEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINN 120

Query: 81  AGKFSHNHAVSEDGIEMTFATNFLGHF 1
           AGK++H HA+SEDG+EMTFATN+LGHF
Sbjct: 121 AGKYAHKHAISEDGVEMTFATNYLGHF 147


>ref|NP_194136.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|16612264|gb|AAL27501.1|AF439829_1
           AT4g24050/T19F6_40 [Arabidopsis thaliana]
           gi|2262111|gb|AAB63619.1| ribitol dehydrogenase isolog
           [Arabidopsis thaliana] gi|5668633|emb|CAB51648.1|
           putative protein [Arabidopsis thaliana]
           gi|7269254|emb|CAB81323.1| putative protein [Arabidopsis
           thaliana] gi|21928085|gb|AAM78071.1| AT4g24050/T19F6_40
           [Arabidopsis thaliana] gi|332659445|gb|AEE84845.1|
           Rossmann-fold NAD(P)-binding domain-containing protein
           [Arabidopsis thaliana]
          Length = 332

 Score =  226 bits (575), Expect = 2e-57
 Identities = 112/147 (76%), Positives = 130/147 (88%)
 Frame = -3

Query: 441 MLDTVKYLLGWKGPSGYGSKSTADQVTASVDLRSSTAIITGATSGIGAETARVLAKRGAR 262
           M++T KYLLG  G SG+GSKSTA++VT + DLRS TA+ITGATSGIGAETARVLAKRGAR
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGAR 60

Query: 261 LVLPARNKKAAEETKARIQSEFPGAEVLIMQLDLSSLSSVRNFVKEFESLDLPLNLLINN 82
           L+ PARN KAAEE K RI SEFP  E+++M+LDLSS++SVRNFV +FESLDLPLNLLINN
Sbjct: 61  LIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINN 120

Query: 81  AGKFSHNHAVSEDGIEMTFATNFLGHF 1
           AGK +H HA+SEDGIEMTFATN+LGHF
Sbjct: 121 AGKLAHEHAISEDGIEMTFATNYLGHF 147


>ref|XP_002869743.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297315579|gb|EFH46002.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 332

 Score =  225 bits (573), Expect = 4e-57
 Identities = 112/147 (76%), Positives = 129/147 (87%)
 Frame = -3

Query: 441 MLDTVKYLLGWKGPSGYGSKSTADQVTASVDLRSSTAIITGATSGIGAETARVLAKRGAR 262
           M++T KYLLG  G SG+GSKSTA++VT + DLRS T IITGATSGIGAETARVLAKRGAR
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENCDLRSVTVIITGATSGIGAETARVLAKRGAR 60

Query: 261 LVLPARNKKAAEETKARIQSEFPGAEVLIMQLDLSSLSSVRNFVKEFESLDLPLNLLINN 82
           L+ PARN KAAEE K RI SEFP  E+++M+LDLSS++SVRNFV +FESLDLPLNLLINN
Sbjct: 61  LIFPARNVKAAEEAKERIVSEFPETEIVVMELDLSSIASVRNFVADFESLDLPLNLLINN 120

Query: 81  AGKFSHNHAVSEDGIEMTFATNFLGHF 1
           AGK +H HA+SEDGIEMTFATN+LGHF
Sbjct: 121 AGKLAHEHAISEDGIEMTFATNYLGHF 147


>ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|297742402|emb|CBI34551.3| unnamed protein
           product [Vitis vinifera]
          Length = 336

 Score =  223 bits (568), Expect = 2e-56
 Identities = 116/148 (78%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
 Frame = -3

Query: 441 MLDTVKYLLGWKGPSGYGSKSTADQVTASV-DLRSSTAIITGATSGIGAETARVLAKRGA 265
           MLD +KYLLG  G SGYGSKSTA++VT +  DL S TA+ITGATSGIGAETARVLAKRGA
Sbjct: 1   MLDALKYLLGSFGASGYGSKSTAEEVTENCPDLGSVTAVITGATSGIGAETARVLAKRGA 60

Query: 264 RLVLPARNKKAAEETKARIQSEFPGAEVLIMQLDLSSLSSVRNFVKEFESLDLPLNLLIN 85
           RLVLPAR+ KAAEE KARI +EFP +E+++M LDLSSL SVR FV EFESLDLPLNLLIN
Sbjct: 61  RLVLPARSLKAAEEAKARIVAEFPNSEIVVMALDLSSLDSVRCFVSEFESLDLPLNLLIN 120

Query: 84  NAGKFSHNHAVSEDGIEMTFATNFLGHF 1
           NAGKF+H HA+SEDGIEMTFATN+LGHF
Sbjct: 121 NAGKFTHEHAISEDGIEMTFATNYLGHF 148


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