BLASTX nr result

ID: Cnidium21_contig00044988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044988
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539117.1| PREDICTED: transcription regulatory protein ...   259   2e-67
ref|XP_002281240.2| PREDICTED: transcription regulatory protein ...   258   3e-67
emb|CBI26213.3| unnamed protein product [Vitis vinifera]              258   3e-67
ref|XP_003535660.1| PREDICTED: transcription regulatory protein ...   254   4e-66
ref|XP_003610678.1| Chromatin remodeling complex subunit [Medica...   254   4e-66

>ref|XP_003539117.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1063

 Score =  259 bits (661), Expect = 2e-67
 Identities = 123/138 (89%), Positives = 130/138 (94%)
 Frame = -2

Query: 414 GEGKFNVWLTHYDLIMRDKTYLKKIHWHYMIVDEGHRLKNHECALARTLDGGYKIRRRLL 235
           GEGKFNV +THYDLIMRDK +LKKIHW Y+IVDEGHRLKNHECALARTLD GY I+RRLL
Sbjct: 467 GEGKFNVLITHYDLIMRDKAFLKKIHWLYLIVDEGHRLKNHECALARTLDSGYHIQRRLL 526

Query: 234 LTGTPIQNSLQELWSLLNFLLPNIFNSVDNFEEWFNAPFADRCDVSLTDEEQLLVIRRLH 55
           LTGTPIQNSLQELWSLLNFLLPNIFNSV NFE+WFNAPFADR DVSLTDEEQLL+IRRLH
Sbjct: 527 LTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLH 586

Query: 54  HVIRPFILRRKKDEVEKY 1
            VIRPFILRRKKDEVEK+
Sbjct: 587 QVIRPFILRRKKDEVEKF 604


>ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
           vinifera]
          Length = 1114

 Score =  258 bits (660), Expect = 3e-67
 Identities = 123/138 (89%), Positives = 130/138 (94%)
 Frame = -2

Query: 414 GEGKFNVWLTHYDLIMRDKTYLKKIHWHYMIVDEGHRLKNHECALARTLDGGYKIRRRLL 235
           GEGKFNV +THYDLIMRDK +LKKI WHYMIVDEGHRLKNHECALARTL  GY+I+RRLL
Sbjct: 507 GEGKFNVLITHYDLIMRDKAFLKKIDWHYMIVDEGHRLKNHECALARTLVSGYQIQRRLL 566

Query: 234 LTGTPIQNSLQELWSLLNFLLPNIFNSVDNFEEWFNAPFADRCDVSLTDEEQLLVIRRLH 55
           LTGTPIQNSLQELWSLLNFLLP+IFNSV NFEEWFNAPFADR DVSLTDEE+LL+I RLH
Sbjct: 567 LTGTPIQNSLQELWSLLNFLLPSIFNSVTNFEEWFNAPFADRSDVSLTDEEELLIIHRLH 626

Query: 54  HVIRPFILRRKKDEVEKY 1
           HVIRPFILRRKKDEVEKY
Sbjct: 627 HVIRPFILRRKKDEVEKY 644


>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  258 bits (660), Expect = 3e-67
 Identities = 123/138 (89%), Positives = 130/138 (94%)
 Frame = -2

Query: 414 GEGKFNVWLTHYDLIMRDKTYLKKIHWHYMIVDEGHRLKNHECALARTLDGGYKIRRRLL 235
           GEGKFNV +THYDLIMRDK +LKKI WHYMIVDEGHRLKNHECALARTL  GY+I+RRLL
Sbjct: 496 GEGKFNVLITHYDLIMRDKAFLKKIDWHYMIVDEGHRLKNHECALARTLVSGYQIQRRLL 555

Query: 234 LTGTPIQNSLQELWSLLNFLLPNIFNSVDNFEEWFNAPFADRCDVSLTDEEQLLVIRRLH 55
           LTGTPIQNSLQELWSLLNFLLP+IFNSV NFEEWFNAPFADR DVSLTDEE+LL+I RLH
Sbjct: 556 LTGTPIQNSLQELWSLLNFLLPSIFNSVTNFEEWFNAPFADRSDVSLTDEEELLIIHRLH 615

Query: 54  HVIRPFILRRKKDEVEKY 1
           HVIRPFILRRKKDEVEKY
Sbjct: 616 HVIRPFILRRKKDEVEKY 633


>ref|XP_003535660.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1072

 Score =  254 bits (650), Expect = 4e-66
 Identities = 122/138 (88%), Positives = 129/138 (93%)
 Frame = -2

Query: 414 GEGKFNVWLTHYDLIMRDKTYLKKIHWHYMIVDEGHRLKNHECALARTLDGGYKIRRRLL 235
           GEGKFNV LTHYDLIMRDK +LKKI W Y+IVDEGHRLKNHE ALARTLD GY+I+RRLL
Sbjct: 466 GEGKFNVLLTHYDLIMRDKAFLKKIQWKYLIVDEGHRLKNHESALARTLDNGYRIQRRLL 525

Query: 234 LTGTPIQNSLQELWSLLNFLLPNIFNSVDNFEEWFNAPFADRCDVSLTDEEQLLVIRRLH 55
           LTGTPIQNSLQELWSLLNFLLPNIFNSV NFE+WFNAPFADR DVSLTDEEQLL+IRRLH
Sbjct: 526 LTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLH 585

Query: 54  HVIRPFILRRKKDEVEKY 1
            VIRPFILRRKKDEVEK+
Sbjct: 586 QVIRPFILRRKKDEVEKF 603


>ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355512013|gb|AES93636.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1063

 Score =  254 bits (650), Expect = 4e-66
 Identities = 122/138 (88%), Positives = 127/138 (92%)
 Frame = -2

Query: 414 GEGKFNVWLTHYDLIMRDKTYLKKIHWHYMIVDEGHRLKNHECALARTLDGGYKIRRRLL 235
           GEGKFNV LTHYDLIMRDK +LKKIHW Y+IVDEGHRLKNHECALARTLD  Y I RRLL
Sbjct: 459 GEGKFNVLLTHYDLIMRDKAFLKKIHWKYLIVDEGHRLKNHECALARTLDNSYHIERRLL 518

Query: 234 LTGTPIQNSLQELWSLLNFLLPNIFNSVDNFEEWFNAPFADRCDVSLTDEEQLLVIRRLH 55
           LTGTPIQNSLQELWSLLNFLLPNIFNSV NFE+WFNAPFADR DVSLTDEEQLL+IRRLH
Sbjct: 519 LTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLH 578

Query: 54  HVIRPFILRRKKDEVEKY 1
            VIRPFILRRKK EVEK+
Sbjct: 579 QVIRPFILRRKKAEVEKF 596


Top