BLASTX nr result

ID: Cnidium21_contig00044979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044979
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote...    92   4e-17
emb|CAN69718.1| hypothetical protein VITISV_026311 [Vitis vinifera]    92   4e-17
ref|XP_002515546.1| protein with unknown function [Ricinus commu...    91   1e-16
ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|1...    91   1e-16
ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...    90   2e-16

>ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|296082008|emb|CBI21013.3| unnamed protein
           product [Vitis vinifera]
          Length = 158

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/43 (90%), Positives = 39/43 (90%)
 Frame = +2

Query: 56  SSSFGITGPDVRPGDWYCNIGNCGAHNFASRSSCFKCGVFKDE 184
           SSSFG TGPDVRPGDWYC IGNCGAHNFASRSSCFKCG  KDE
Sbjct: 44  SSSFGFTGPDVRPGDWYCTIGNCGAHNFASRSSCFKCGGLKDE 86


>emb|CAN69718.1| hypothetical protein VITISV_026311 [Vitis vinifera]
          Length = 127

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/43 (90%), Positives = 39/43 (90%)
 Frame = +2

Query: 56  SSSFGITGPDVRPGDWYCNIGNCGAHNFASRSSCFKCGVFKDE 184
           SSSFG TGPDVRPGDWYC IGNCGAHNFASRSSCFKCG  KDE
Sbjct: 44  SSSFGFTGPDVRPGDWYCTIGNCGAHNFASRSSCFKCGGLKDE 86


>ref|XP_002515546.1| protein with unknown function [Ricinus communis]
           gi|223545490|gb|EEF46995.1| protein with unknown
           function [Ricinus communis]
          Length = 154

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/43 (88%), Positives = 38/43 (88%)
 Frame = +2

Query: 56  SSSFGITGPDVRPGDWYCNIGNCGAHNFASRSSCFKCGVFKDE 184
           SSSFG TGPDVRPGDWYC  GNCGAHNFASRSSCFKCG  KDE
Sbjct: 46  SSSFGFTGPDVRPGDWYCTFGNCGAHNFASRSSCFKCGASKDE 88


>ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|118482028|gb|ABK92945.1|
           unknown [Populus trichocarpa]
           gi|222854629|gb|EEE92176.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/48 (81%), Positives = 39/48 (81%)
 Frame = +2

Query: 41  GTASLSSSFGITGPDVRPGDWYCNIGNCGAHNFASRSSCFKCGVFKDE 184
           G  S   SFG TGPDVRPGDWYC  GNCGAHNFASRSSCFKCGV KDE
Sbjct: 41  GGRSSGGSFGFTGPDVRPGDWYCTAGNCGAHNFASRSSCFKCGVSKDE 88


>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = +2

Query: 59  SSFGITGPDVRPGDWYCNIGNCGAHNFASRSSCFKCGVFKDE 184
           SSFG TG DVRPGDWYCN GNCGAHNFASRS+CFKCG FKDE
Sbjct: 45  SSFGFTGSDVRPGDWYCNAGNCGAHNFASRSNCFKCGAFKDE 86


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