BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044968
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   207   7e-52
ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containi...   205   3e-51
ref|XP_002531058.1| pentatricopeptide repeat-containing protein,...   196   2e-48
ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containi...   192   3e-47
ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   190   1e-46

>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  207 bits (527), Expect = 7e-52
 Identities = 91/143 (63%), Positives = 118/143 (82%)
 Frame = +1

Query: 4   KQIHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGYA 183
           +QIHAFSIRHG+ + NPD GK+LIFT++S    MSYA+ +F  ++ PN+FTWNTMI GYA
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116

Query: 184 ESDDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKLVF 363
           ES++  PA++++R+M    + PDTHTYPFLLKA+ KLMDVREGEKVH + +RNG+E LVF
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176

Query: 364 VQNALVHVYGACGYAESAYKVFE 432
           VQN LVH+Y ACG+AESA+K+FE
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFE 199



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/143 (30%), Positives = 77/143 (53%)
 Frame = +1

Query: 4   KQIHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGYA 183
           +++H+ +IR+G   E+  F ++ +  + +  G    A+ +F+ + + N+ TWN++I GYA
Sbjct: 160 EKVHSIAIRNGF--ESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYA 217

Query: 184 ESDDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKLVF 363
            +     A+ +FR M    V PD  T   LL A  +L  +  G + H  +V+ G +  + 
Sbjct: 218 LNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLH 277

Query: 364 VQNALVHVYGACGYAESAYKVFE 432
             NAL+ +Y  CG    A+KVF+
Sbjct: 278 AGNALLDLYAKCGSIRQAHKVFD 300


>ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  205 bits (522), Expect = 3e-51
 Identities = 98/144 (68%), Positives = 114/144 (79%)
 Frame = +1

Query: 1   LKQIHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGY 180
           LKQIHAFSIRHG+ + NPD GKHLIFTIVSLS  MSYA NVF  +  PNVFTWNT+I GY
Sbjct: 34  LKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGY 93

Query: 181 AESDDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKLV 360
           AESD+  PA   +R+M    V PDTHTYPFLLKA+ K ++VREGE +H V +RNG+E LV
Sbjct: 94  AESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLV 153

Query: 361 FVQNALVHVYGACGYAESAYKVFE 432
           FVQN+L+H+Y ACG  ESAYKVFE
Sbjct: 154 FVQNSLLHIYAACGDTESAYKVFE 177



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/140 (31%), Positives = 73/140 (52%)
 Frame = +1

Query: 10  IHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGYAES 189
           IH+ +IR+G   E+  F ++ +  I +  G    A  VF+ +++ ++  WN+MI G+A +
Sbjct: 140 IHSVTIRNGF--ESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALN 197

Query: 190 DDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKLVFVQ 369
                A+ +FR M    V PD  T   LL A  +L  +  G +VH  +++ G  K   V 
Sbjct: 198 GRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVT 257

Query: 370 NALVHVYGACGYAESAYKVF 429
           N+L+ +Y  CG    A +VF
Sbjct: 258 NSLLDLYAKCGAIREAQRVF 277


>ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529353|gb|EEF31319.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  196 bits (498), Expect = 2e-48
 Identities = 87/144 (60%), Positives = 119/144 (82%)
 Frame = +1

Query: 1   LKQIHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGY 180
           L+QIHAFSIRHG+   NPD GKHLI++IVS+S  M+YA+N+F  ++ PN+FTWNTMI G+
Sbjct: 56  LQQIHAFSIRHGVLPNNPDMGKHLIYSIVSVSAPMTYAHNIFTLIQNPNIFTWNTMIRGH 115

Query: 181 AESDDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKLV 360
           AES++ +PAI+++ R+    + PDTHTYPFLLKAV K+++VR GEK+H + +RNG+E LV
Sbjct: 116 AESENPKPAIELYHRLHFNSIEPDTHTYPFLLKAVSKMVNVRVGEKIHSISIRNGFESLV 175

Query: 361 FVQNALVHVYGACGYAESAYKVFE 432
           FVQN+L+H+Y ACG  ESA+K+FE
Sbjct: 176 FVQNSLMHMYAACGQYESAHKLFE 199



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/143 (27%), Positives = 74/143 (51%)
 Frame = +1

Query: 4   KQIHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGYA 183
           ++IH+ SIR+G   E+  F ++ +  + +  G    A+ +F+ +   ++  WNT I G+A
Sbjct: 160 EKIHSISIRNGF--ESLVFVQNSLMHMYAACGQYESAHKLFEFMPDRDLVAWNTAISGFA 217

Query: 184 ESDDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKLVF 363
            +     A+ ++  M    V PD  T   LL A  +L  +  G ++H  +V+ G ++ + 
Sbjct: 218 LNGKPNEALKLYMEMGLEGVEPDGFTLVSLLSACAELGALALGRRIHAYMVKVGLDENLH 277

Query: 364 VQNALVHVYGACGYAESAYKVFE 432
             N+L+ +Y  CG    A +VF+
Sbjct: 278 ANNSLIDLYAKCGRIRDAQQVFD 300


>ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/145 (62%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1   LKQIHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGY 180
           LKQIHAFSIRHG+  +NPDF KHLIF +VSLS  MS+A  +F  ++ PN+FTWNTMI G+
Sbjct: 51  LKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGF 110

Query: 181 AESDDSRPAIDVFRRMRGL-LVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKL 357
           AES++  PA+++F +M     +LPDTHT+PFL KAV KLMDV  GE +H VVVRNG++ L
Sbjct: 111 AESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSL 170

Query: 358 VFVQNALVHVYGACGYAESAYKVFE 432
            FVQN+LVH+Y   G+AESAY+VFE
Sbjct: 171 RFVQNSLVHMYSVFGFAESAYQVFE 195



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/141 (29%), Positives = 71/141 (50%)
 Frame = +1

Query: 10  IHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFKNVEKPNVFTWNTMIGGYAES 189
           IH+  +R+G   ++  F ++ +  + S+ G    A  VF+ +   +   WN++I G+A +
Sbjct: 158 IHSVVVRNGF--DSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALN 215

Query: 190 DDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHCVVVRNGYEKLVFVQ 369
                A+ ++R M    V PD  T   LL A  +L  +  GE+VH  +V+ G  +     
Sbjct: 216 GMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHAS 275

Query: 370 NALVHVYGACGYAESAYKVFE 432
           NAL+ +Y  CG    A KVF+
Sbjct: 276 NALLDLYSKCGNFRDAQKVFD 296


>ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Glycine max]
          Length = 661

 Score =  190 bits (482), Expect = 1e-46
 Identities = 93/155 (60%), Positives = 112/155 (72%), Gaps = 11/155 (7%)
 Frame = +1

Query: 1   LKQIHAFSIRHGLRIENPDFGKHLIFTIVSLSGAMSYANNVFK-----------NVEKPN 147
           L+ IHAFSIRHG+ + NPD GKHLIFTIVSLS  MSYA NVF             +  PN
Sbjct: 35  LRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMIHNPN 94

Query: 148 VFTWNTMIGGYAESDDSRPAIDVFRRMRGLLVLPDTHTYPFLLKAVGKLMDVREGEKVHC 327
           VFTWNTM  GYAESD+  PA+  +R+M    + PDTHTYPFLLKA+ K ++VREGE +H 
Sbjct: 95  VFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHS 154

Query: 328 VVVRNGYEKLVFVQNALVHVYGACGYAESAYKVFE 432
           V +RNG+E LVFVQN+L+H+Y ACG  ESA+ VFE
Sbjct: 155 VTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFE 189