BLASTX nr result

ID: Cnidium21_contig00044921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044921
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    68   7e-10
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    66   3e-09
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002525921.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/96 (42%), Positives = 59/96 (61%)
 Frame = +3

Query: 6   FIAGLGGKFMGDFAPKIAEAMAFCEALSWIKGKGLSNVAFELDSLQVVQACARRRQDSSY 185
           F+  +   F G + P+IAE +A  EALSW + + L NV FELD L +V+A  R+  D S 
Sbjct: 64  FVCAMAVSFAGAYIPEIAEGLAIQEALSWARDRQLLNVVFELDCLHIVEALLRKGTDRSS 123

Query: 186 VGDIIEECLNIFKDLRSHSIKFVRRSVNMAAHRLAR 293
           +G II++C  +   + + S  FV+RS N  AH+LAR
Sbjct: 124 LGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHKLAR 159


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
 Frame = +3

Query: 24   GKFMGDFA--------PKIAEAMAFCEALSWIKGKGLSNVAFELDSLQVVQACARRRQDS 179
            G+FMG FA        PK+ EA+   E LSWI  +  S +  E D L+VVQA   +   +
Sbjct: 696  GRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPN 755

Query: 180  SYVGDIIEECLNIFKDLRSHSIKFVRRSVNMAAHRLARETISMS 311
            +  G II +CL++ + L    + + RRS N AAH LA    S +
Sbjct: 756  TSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFT 799


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/96 (36%), Positives = 52/96 (54%)
 Frame = +3

Query: 6   FIAGLGGKFMGDFAPKIAEAMAFCEALSWIKGKGLSNVAFELDSLQVVQACARRRQDSSY 185
           F+ G  G   G F  K+AEA+   EA+ W+   G SNV FE D+  VV A      D   
Sbjct: 204 FVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFE 263

Query: 186 VGDIIEECLNIFKDLRSHSIKFVRRSVNMAAHRLAR 293
            G +I +C  + +   ++S++F+R+  N+ AH LAR
Sbjct: 264 FGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLAR 299


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/100 (38%), Positives = 53/100 (53%)
 Frame = +3

Query: 6   FIAGLGGKFMGDFAPKIAEAMAFCEALSWIKGKGLSNVAFELDSLQVVQACARRRQDSSY 185
           F A   G   G   P++AEA++  E L W+KG  L+ V  E D L +V A  +   +SS 
Sbjct: 165 FRAATNGLISGPLDPQVAEALSLREDLCWVKGLDLNYVVSESDCLTLVNAVNKVGVNSSL 224

Query: 186 VGDIIEECLNIFKDLRSHSIKFVRRSVNMAAHRLARETIS 305
            G +I +C +  K++    I FV+R  N  AH LAR T S
Sbjct: 225 FGLLIGDCRSFLKEMNHAHIVFVKRFGNRVAHLLARVTDS 264


>ref|XP_002525921.1| conserved hypothetical protein [Ricinus communis]
           gi|223534750|gb|EEF36441.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/92 (39%), Positives = 52/92 (56%)
 Frame = +3

Query: 36  GDFAPKIAEAMAFCEALSWIKGKGLSNVAFELDSLQVVQACARRRQDSSYVGDIIEECLN 215
           G +   +AEAMA  EALSWIK    S V+ ++DSL V   C     D+   G II+ C +
Sbjct: 99  GVYEANLAEAMAVREALSWIKHMNWSRVSIDMDSLGV---CVALTSDNLSFGLIIDGCKH 155

Query: 216 IFKDLRSHSIKFVRRSVNMAAHRLARETISMS 311
           +  ++   +   +RRS N  AH LAR ++S+S
Sbjct: 156 VVANIHDAAFTCIRRSTNHCAHMLARASVSLS 187


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