BLASTX nr result

ID: Cnidium21_contig00044914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044914
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30066.3| unnamed protein product [Vitis vinifera]              151   6e-35
ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...   151   6e-35
ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_003520972.1| PREDICTED: peptide chain release factor 2-li...   136   2e-30
ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group] g...   135   3e-30

>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/138 (57%), Positives = 96/138 (69%)
 Frame = +3

Query: 3   QPSNEKTKFYKELGFFSLRKKIEDYVINXXXXXXXXXXXXXXXRVKQEDMIQACDLWDDV 182
           Q  ++K K +KELG FSLRKKIE  V+                R++QE+MI+  +LWDDV
Sbjct: 35  QSMDDKNKVFKELGLFSLRKKIEGVVLQADMLAPAALELEEASRIRQEEMIRKYNLWDDV 94

Query: 183 SISNDILLKLADSVKVVDALKDLQYKAEEAKLLTELAGKDVINHRLFKQAYATSVDVRKF 362
           + SN+IL KLADS KVVD LKDL YKAEEAKL+T+L   D INH LF+QAY  SVDV KF
Sbjct: 95  TKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLVEMDAINHGLFEQAYNASVDVSKF 154

Query: 363 LDKYKMSKLLEGPFDAEG 416
           L +Y+MSKLL G FD EG
Sbjct: 155 LYQYEMSKLLRGQFDMEG 172


>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/138 (57%), Positives = 96/138 (69%)
 Frame = +3

Query: 3   QPSNEKTKFYKELGFFSLRKKIEDYVINXXXXXXXXXXXXXXXRVKQEDMIQACDLWDDV 182
           Q  ++K K +KELG FSLRKKIE  V+                R++QE+MI+  +LWDDV
Sbjct: 38  QSMDDKNKVFKELGLFSLRKKIEGVVLQADMLAPAALELEEASRIRQEEMIRKYNLWDDV 97

Query: 183 SISNDILLKLADSVKVVDALKDLQYKAEEAKLLTELAGKDVINHRLFKQAYATSVDVRKF 362
           + SN+IL KLADS KVVD LKDL YKAEEAKL+T+L   D INH LF+QAY  SVDV KF
Sbjct: 98  TKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLVEMDAINHGLFEQAYNASVDVSKF 157

Query: 363 LDKYKMSKLLEGPFDAEG 416
           L +Y+MSKLL G FD EG
Sbjct: 158 LYQYEMSKLLRGQFDMEG 175


>ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|222853978|gb|EEE91525.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/135 (52%), Positives = 98/135 (72%)
 Frame = +3

Query: 12  NEKTKFYKELGFFSLRKKIEDYVINXXXXXXXXXXXXXXXRVKQEDMIQACDLWDDVSIS 191
           ++K   YK+LG FSL+K IED V+                R+KQE+MI  C+LW+D + S
Sbjct: 2   DDKNNVYKQLGLFSLKKNIEDTVLRAEMLAPTALEHEEARRIKQEEMIHECNLWEDPAKS 61

Query: 192 NDILLKLADSVKVVDALKDLQYKAEEAKLLTELAGKDVINHRLFKQAYATSVDVRKFLDK 371
           N+IL+KLA S K +DALKDL+YKAEEAKL+++L   + IN++LFKQAY  S+DVRK LD+
Sbjct: 62  NEILIKLAGSAKAIDALKDLKYKAEEAKLISQLVEMEAINYQLFKQAYTASLDVRKLLDQ 121

Query: 372 YKMSKLLEGPFDAEG 416
           Y+MS+LL+GP+D +G
Sbjct: 122 YEMSRLLKGPYDKQG 136


>ref|XP_003520972.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 437

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/133 (50%), Positives = 95/133 (71%)
 Frame = +3

Query: 18  KTKFYKELGFFSLRKKIEDYVINXXXXXXXXXXXXXXXRVKQEDMIQACDLWDDVSISND 197
           K   YK++G FSL++KIED V+                 +KQE+M++  D+WDD + SND
Sbjct: 57  KKDIYKQVGLFSLKRKIEDAVLRAETFASTALEMEEATWIKQEEMVRDFDMWDDPAKSND 116

Query: 198 ILLKLADSVKVVDALKDLQYKAEEAKLLTELAGKDVINHRLFKQAYATSVDVRKFLDKYK 377
           IL+KLA+S KVVD+LKDL+YK EEAKL+ +LA  + I++ L+KQAY TS+DV + +D+Y+
Sbjct: 117 ILVKLANSAKVVDSLKDLKYKVEEAKLINQLAEINAIDYGLYKQAYETSLDVSEIVDQYE 176

Query: 378 MSKLLEGPFDAEG 416
           +SKLL+GPFD  G
Sbjct: 177 ISKLLKGPFDMAG 189


>ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group]
           gi|255676317|dbj|BAF17292.2| Os05g0375600 [Oryza sativa
           Japonica Group]
          Length = 407

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/129 (51%), Positives = 94/129 (72%)
 Frame = +3

Query: 30  YKELGFFSLRKKIEDYVINXXXXXXXXXXXXXXXRVKQEDMIQACDLWDDVSISNDILLK 209
           YKELG +SL+K+IED V+                R++QE++++  +LWD+ + S++ L  
Sbjct: 50  YKELGLYSLKKRIEDAVVRVETTASSALEMEEARRIRQEEVLRGRNLWDNPAKSHETLSA 109

Query: 210 LADSVKVVDALKDLQYKAEEAKLLTELAGKDVINHRLFKQAYATSVDVRKFLDKYKMSKL 389
           LAD+++VVD LKDL+YKAEEAKL+++L+  DVIN  LFKQAY TSVD  +FLD+Y+M KL
Sbjct: 110 LADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTSVDATEFLDRYQMYKL 169

Query: 390 LEGPFDAEG 416
           L+GP+D EG
Sbjct: 170 LKGPYDKEG 178


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