BLASTX nr result

ID: Cnidium21_contig00044885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044885
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277407.1| PREDICTED: mitochondrial substrate carrier f...   168   4e-40
ref|XP_002316345.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|NP_001065240.1| Os12g0103000 [Oryza sativa Japonica Group] g...   163   1e-38
ref|NP_001065524.1| Os11g0103700 [Oryza sativa Japonica Group] g...   163   1e-38
ref|XP_002879576.1| mitochondrial substrate carrier family prote...   163   1e-38

>ref|XP_002277407.1| PREDICTED: mitochondrial substrate carrier family protein C [Vitis
            vinifera] gi|296086059|emb|CBI31500.3| unnamed protein
            product [Vitis vinifera]
          Length = 829

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/100 (80%), Positives = 90/100 (90%)
 Frame = -2

Query: 414  SYQAIQHLLGRELEPWETIFVGAVSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIALS 235
            S + +  LLGRELEPWETI VGA+SGGLA+V TTPFDV+KTRMMTAT G+ VSMSM+A S
Sbjct: 714  SKKVVHKLLGRELEPWETIAVGALSGGLAAVVTTPFDVMKTRMMTATHGRTVSMSMVAFS 773

Query: 234  IIRHEGPLGLFKGAVPRFFWVAPLGAMNFAGYELLRKAMD 115
            I+RHEGP+GLFKGAVPRFFW+APLGAMNFAGYEL RKAMD
Sbjct: 774  ILRHEGPIGLFKGAVPRFFWIAPLGAMNFAGYELARKAMD 813


>ref|XP_002316345.1| predicted protein [Populus trichocarpa] gi|222865385|gb|EEF02516.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/100 (80%), Positives = 88/100 (88%)
 Frame = -2

Query: 414 SYQAIQHLLGRELEPWETIFVGAVSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIALS 235
           S +  Q LL RELEPWETI VGA+SGGL +V TTPFDV+KTRMMTA PG+ VSMS+IA S
Sbjct: 690 SKKVAQQLLRRELEPWETIAVGALSGGLTAVITTPFDVLKTRMMTAPPGRTVSMSLIAFS 749

Query: 234 IIRHEGPLGLFKGAVPRFFWVAPLGAMNFAGYELLRKAMD 115
           I+RHEGPLGLFKGAVPRFFW+APLGAMNFAGYEL RKAMD
Sbjct: 750 ILRHEGPLGLFKGAVPRFFWIAPLGAMNFAGYELARKAMD 789


>ref|NP_001065240.1| Os12g0103000 [Oryza sativa Japonica Group]
           gi|77552786|gb|ABA95582.1| mitochondrial substrate
           carrier family protein, putative, expressed [Oryza
           sativa Japonica Group] gi|113648428|dbj|BAF28940.1|
           Os12g0103000 [Oryza sativa Japonica Group]
           gi|215697003|dbj|BAG90997.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 666

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
 Frame = -2

Query: 408 QAIQHLLGRELEPWETIFVGAVSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIALSII 229
           +A QH+L R+LEPWETI VGA+SGGLA+V TTPFDV+KTRMMTA PG PVSM +I  SI+
Sbjct: 548 KAAQHVLNRDLEPWETIAVGALSGGLAAVVTTPFDVMKTRMMTAPPGTPVSMQLIVFSIL 607

Query: 228 RHEGPLGLFKGAVPRFFWVAPLGAMNFAGYELLRKAMDGTKAQKVTTA--K*SLQGSR 61
           R+EGPLGLFKGA+PRFFW+APLGAMNFAGYEL +KAM  T++    +   K +  GSR
Sbjct: 608 RNEGPLGLFKGAIPRFFWIAPLGAMNFAGYELAKKAMIQTESDSADSVHEKRTTVGSR 665


>ref|NP_001065524.1| Os11g0103700 [Oryza sativa Japonica Group]
           gi|77548253|gb|ABA91050.1| mitochondrial substrate
           carrier family protein, putative, expressed [Oryza
           sativa Japonica Group] gi|113644228|dbj|BAF27369.1|
           Os11g0103700 [Oryza sativa Japonica Group]
           gi|125575919|gb|EAZ17141.1| hypothetical protein
           OsJ_32642 [Oryza sativa Japonica Group]
           gi|215678766|dbj|BAG95203.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 670

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 2/118 (1%)
 Frame = -2

Query: 408 QAIQHLLGRELEPWETIFVGAVSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIALSII 229
           +A QH+L R+LEPWETI VGA+SGGLA+V TTPFDV+KTRMMTA PG PVSM +I  SI+
Sbjct: 552 KAAQHVLNRDLEPWETIAVGALSGGLAAVVTTPFDVMKTRMMTAPPGTPVSMQLIVFSIL 611

Query: 228 RHEGPLGLFKGAVPRFFWVAPLGAMNFAGYELLRKAMDGTKAQKVTTA--K*SLQGSR 61
           R+EGPLGLFKGA+PRFFW+APLGAMNFAGYEL +KAM  T++    +   K +  GSR
Sbjct: 612 RNEGPLGLFKGAIPRFFWIAPLGAMNFAGYELAKKAMIQTESDSTDSVHEKRTTVGSR 669


>ref|XP_002879576.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325415|gb|EFH55835.1| mitochondrial
           substrate carrier family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = -2

Query: 414 SYQAIQHLLGRELEPWETIFVGAVSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIALS 235
           S + +   LGRELE WETI VGAVSGG+A+V TTPFDV+KTRMMTATPG+P+SMSM+ +S
Sbjct: 703 SKKMVAQALGRELEAWETIAVGAVSGGIAAVVTTPFDVMKTRMMTATPGRPISMSMVVVS 762

Query: 234 IIRHEGPLGLFKGAVPRFFWVAPLGAMNFAGYELLRKAM 118
           I+R+EGPLGLFKGAVPRFFWVAPLGAMNFAGYEL +KAM
Sbjct: 763 ILRNEGPLGLFKGAVPRFFWVAPLGAMNFAGYELAKKAM 801


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