BLASTX nr result

ID: Cnidium21_contig00044859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044859
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866994.1| homeobox-leucine zipper protein ATHB-40 [Ara...   144   6e-33
ref|XP_002273007.1| PREDICTED: homeobox-leucine zipper protein A...   144   1e-32
ref|XP_002310795.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|NP_195392.2| homeobox protein 40 [Arabidopsis thaliana] gi|3...   142   4e-32
emb|CAB16824.1| homeodomain protein [Arabidopsis thaliana] gi|72...   142   4e-32

>ref|XP_002866994.1| homeobox-leucine zipper protein ATHB-40 [Arabidopsis lyrata subsp.
           lyrata] gi|297312830|gb|EFH43253.1| homeobox-leucine
           zipper protein ATHB-40 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 217

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/97 (71%), Positives = 86/97 (88%), Gaps = 5/97 (5%)
 Frame = -3

Query: 324 KPQRRRKKNKG-----EASCSMFRKRKLADEQVNMLEINFENEHKLDSERKDRIASELGL 160
           +P+RRRKK+KG     + S S+FRKRKL DEQVNMLE++F +EHKL+SERKDR+A+ELGL
Sbjct: 33  QPKRRRKKSKGALASGDGSNSLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGL 92

Query: 159 DPRQVAVWFQNRRARWKSKKLEDEYSKLKSEHDSTVV 49
           DPRQVAVWFQNRRARWK+K+LE+EY+KLK+ HD+ VV
Sbjct: 93  DPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVV 129


>ref|XP_002273007.1| PREDICTED: homeobox-leucine zipper protein ATHB-40 [Vitis vinifera]
           gi|297735199|emb|CBI17561.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/92 (76%), Positives = 81/92 (88%)
 Frame = -3

Query: 324 KPQRRRKKNKGEASCSMFRKRKLADEQVNMLEINFENEHKLDSERKDRIASELGLDPRQV 145
           K +RRRKK+KGE+S    RKRKL++EQV  LE+NF NEHKL+SERKD+IASELGLDPRQV
Sbjct: 35  KVRRRRKKSKGESSSGCARKRKLSEEQVTHLELNFGNEHKLESERKDKIASELGLDPRQV 94

Query: 144 AVWFQNRRARWKSKKLEDEYSKLKSEHDSTVV 49
           AVWFQNRRARWKSKKLE+E+SKLK  H+S VV
Sbjct: 95  AVWFQNRRARWKSKKLEEEFSKLKIVHESVVV 126


>ref|XP_002310795.1| predicted protein [Populus trichocarpa] gi|222853698|gb|EEE91245.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/92 (75%), Positives = 83/92 (90%)
 Frame = -3

Query: 324 KPQRRRKKNKGEASCSMFRKRKLADEQVNMLEINFENEHKLDSERKDRIASELGLDPRQV 145
           KP+RRRKKNK +A  S  RKRKL +EQVN+LE+NF NEHKL+SERKD++ASELGLDPRQV
Sbjct: 31  KPRRRRKKNK-DADLSGARKRKLNEEQVNLLEMNFGNEHKLESERKDKLASELGLDPRQV 89

Query: 144 AVWFQNRRARWKSKKLEDEYSKLKSEHDSTVV 49
           AVWFQNRRARWK+KKLE+EY+KLK+ H++ VV
Sbjct: 90  AVWFQNRRARWKNKKLEEEYTKLKTSHENIVV 121


>ref|NP_195392.2| homeobox protein 40 [Arabidopsis thaliana]
           gi|322510138|sp|O23208.3|ATB40_ARATH RecName:
           Full=Homeobox-leucine zipper protein ATHB-40; AltName:
           Full=HD-ZIP protein ATHB-40; AltName: Full=Homeodomain
           transcription factor ATHB-40 gi|332661296|gb|AEE86696.1|
           homeobox protein 40 [Arabidopsis thaliana]
          Length = 216

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/97 (69%), Positives = 84/97 (86%), Gaps = 5/97 (5%)
 Frame = -3

Query: 324 KPQRRRKKNKGEASCS-----MFRKRKLADEQVNMLEINFENEHKLDSERKDRIASELGL 160
           +P+RRRKK KG  + +     +FRKRKL DEQVNMLE++F +EHKL+SERKDR+A+ELGL
Sbjct: 32  QPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGL 91

Query: 159 DPRQVAVWFQNRRARWKSKKLEDEYSKLKSEHDSTVV 49
           DPRQVAVWFQNRRARWK+K+LE+EY+KLK+ HD+ VV
Sbjct: 92  DPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVV 128


>emb|CAB16824.1| homeodomain protein [Arabidopsis thaliana]
           gi|7270622|emb|CAB80340.1| homeodomain protein
           [Arabidopsis thaliana]
          Length = 217

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/97 (69%), Positives = 84/97 (86%), Gaps = 5/97 (5%)
 Frame = -3

Query: 324 KPQRRRKKNKGEASCS-----MFRKRKLADEQVNMLEINFENEHKLDSERKDRIASELGL 160
           +P+RRRKK KG  + +     +FRKRKL DEQVNMLE++F +EHKL+SERKDR+A+ELGL
Sbjct: 33  QPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGL 92

Query: 159 DPRQVAVWFQNRRARWKSKKLEDEYSKLKSEHDSTVV 49
           DPRQVAVWFQNRRARWK+K+LE+EY+KLK+ HD+ VV
Sbjct: 93  DPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVV 129


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