BLASTX nr result

ID: Cnidium21_contig00044801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044801
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511928.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...   121   5e-26
ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...   120   2e-25
ref|XP_002301379.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799...   114   8e-24

>ref|XP_002511928.1| conserved hypothetical protein [Ricinus communis]
           gi|223549108|gb|EEF50597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  122 bits (306), Expect = 3e-26
 Identities = 68/161 (42%), Positives = 93/161 (57%)
 Frame = -1

Query: 485 MVGREQIRPLAPASDRHASDEYTDTSDHLKKKPLRTKTWFKVCMXXXXXXXXXXXXXXXX 306
           MV  EQ+RPLAP++DR +SD+  + + HLKK   R +   K C                 
Sbjct: 1   MVEHEQVRPLAPSADRTSSDD-EEATIHLKKT--RRRRCIKCCGCITASLLVPAIVIVIL 57

Query: 305 XXXXXXXKNPNINLDRISINQLDLNNVTAIVTSQNISLTAQVSVKNQNYATFKYPNTNTN 126
                  K+P I L+ + I  ++L N T      NISL A +SVKN N  +FKY NT + 
Sbjct: 58  IFTVFRVKDPTIKLNNVIITHMELINNTIPKPGTNISLVADLSVKNPNIVSFKYDNTTSA 117

Query: 125 LYYRGTVIGEARGPPGQAKARRTVYINETVDVIIGKLVSNP 3
           LYY G ++GEARGPPG +KARRT+ +N T+D++  KL+SNP
Sbjct: 118 LYYHGVLVGEARGPPGHSKARRTMRLNATIDLVADKLISNP 158


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  121 bits (304), Expect = 5e-26
 Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
 Frame = -1

Query: 485 MVGREQIRPLAPASDRHASDEYTDTSDHLKKKPLRTKTWFKVCMXXXXXXXXXXXXXXXX 306
           MV REQ+RPLAPAS R +S++    ++HL +  LR +   K                   
Sbjct: 1   MVEREQVRPLAPASHRLSSED-DKVTNHLSR--LRRRRCIKCWGCIAATILIQAAVVIIL 57

Query: 305 XXXXXXXKNPNINLDRISINQLDL-NNVTAIVTSQNISLTAQVSVKNQNYATFKYPNTNT 129
                  K+P I L+  ++++L+L N  T      N+SLTA VSVKN N+A+F+Y NT T
Sbjct: 58  VFTVFRVKDPVIKLNGFTVDKLELINGTTTPGPGVNMSLTADVSVKNPNFASFRYKNTTT 117

Query: 128 NLYYRGTVIGEARGPPGQAKARRTVYINETVDVIIGKLVSNP 3
            L+Y GTVIGEARGPPGQAKARRT+ +N T+++I+  L+SNP
Sbjct: 118 TLFYSGTVIGEARGPPGQAKARRTMKMNVTIEIILDSLMSNP 159


>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/166 (39%), Positives = 99/166 (59%), Gaps = 5/166 (3%)
 Frame = -1

Query: 485 MVGREQIRPLAPASDRHASDEYTDTSDHLKKKPLRTKTWFKVCMXXXXXXXXXXXXXXXX 306
           MV R+Q+RPLAPASDR  S +  DT+ ++KK+    +  FK C                 
Sbjct: 1   MVERDQVRPLAPASDRPHSSDDDDTTLNIKKR-FHQRRCFKYCACVSTFVFLVAIIIIIL 59

Query: 305 XXXXXXXKNPNINLDRISINQLDLNNVTAIVT-----SQNISLTAQVSVKNQNYATFKYP 141
                  K+P I ++ ++I +LDL N +  +        N+++ A VSVKN NY++FKY 
Sbjct: 60  IFTVFKIKDPIITMNGVTIEKLDLVNTSGTLLPIPKPGSNMTIKADVSVKNPNYSSFKYS 119

Query: 140 NTNTNLYYRGTVIGEARGPPGQAKARRTVYINETVDVIIGKLVSNP 3
           NT T + YR  VIGEARGPPG++KAR+T+ +N T+D++  K++S+P
Sbjct: 120 NTTTTISYRDAVIGEARGPPGKSKARKTMRMNVTIDIMTDKIMSHP 165


>ref|XP_002301379.1| predicted protein [Populus trichocarpa] gi|222843105|gb|EEE80652.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  115 bits (289), Expect = 3e-24
 Identities = 66/161 (40%), Positives = 91/161 (56%)
 Frame = -1

Query: 485 MVGREQIRPLAPASDRHASDEYTDTSDHLKKKPLRTKTWFKVCMXXXXXXXXXXXXXXXX 306
           M  REQ+RPLAPA++R  SDE   +  H K    R++   K C+                
Sbjct: 1   MAKREQVRPLAPAAERRCSDEEGASKHHKK----RSRKCVKCCVFVTAIFVILVTAIIVL 56

Query: 305 XXXXXXXKNPNINLDRISINQLDLNNVTAIVTSQNISLTAQVSVKNQNYATFKYPNTNTN 126
                  K+P I ++  +I +L+L+N T      NI+L A VSVKN N A+FKY NT T 
Sbjct: 57  RFTVFRVKDPVITMNSFTITKLELSNGTTPKPGVNITLIADVSVKNPNVASFKYSNTTTT 116

Query: 125 LYYRGTVIGEARGPPGQAKARRTVYINETVDVIIGKLVSNP 3
           LYY   ++GEAR  PG A+ARRT+ +N TVD+I  +++SNP
Sbjct: 117 LYYDRQIVGEARNGPGHARARRTMRMNVTVDIIPDRIMSNP 157


>ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799820 [Glycine max]
          Length = 219

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/161 (40%), Positives = 93/161 (57%)
 Frame = -1

Query: 485 MVGREQIRPLAPASDRHASDEYTDTSDHLKKKPLRTKTWFKVCMXXXXXXXXXXXXXXXX 306
           M+  EQ RPLAP+ +R +SDE  +T+ H + +    K   K C                 
Sbjct: 1   MLETEQARPLAPSIERQSSDE-DNTTPHPQTQG--HKKLIKRCACPLISLLLIAIVIIVL 57

Query: 305 XXXXXXXKNPNINLDRISINQLDLNNVTAIVTSQNISLTAQVSVKNQNYATFKYPNTNTN 126
                  K+P I ++ I I +L L N  +     N+SL A VSVKN N A+F+Y NT T+
Sbjct: 58  IFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKNPNVASFRYSNTTTS 117

Query: 125 LYYRGTVIGEARGPPGQAKARRTVYINETVDVIIGKLVSNP 3
           LYY G ++GEARGPPG+AKARRT+ +N T+DVI  +++S+P
Sbjct: 118 LYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISSP 158


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