BLASTX nr result

ID: Cnidium21_contig00044751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044751
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520020.1| protein binding protein, putative [Ricinus c...    57   4e-06
ref|XP_002319894.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06
ref|XP_004169788.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    57   5e-06
ref|XP_004139202.1| PREDICTED: E3 ubiquitin-protein ligase synov...    57   5e-06
ref|XP_002274331.2| PREDICTED: E3 ubiquitin-protein ligase synov...    56   8e-06

>ref|XP_002520020.1| protein binding protein, putative [Ricinus communis]
           gi|223540784|gb|EEF42344.1| protein binding protein,
           putative [Ricinus communis]
          Length = 536

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
 Frame = -3

Query: 666 PAIVYLSTSEVRLIFLLSTCLVVMYISWQLSKRFFFGSLHVQRLTRSMSSHNRDIIS--- 496
           PA+VYLSTS++ L+ LL+  LV+M I WQL+KR F GSL    + R      R+++    
Sbjct: 31  PAMVYLSTSKINLVLLLNMGLVIMCILWQLTKRVFLGSLREAEVERLNEQSWREVMEILF 90

Query: 495 ----SHQFFPVIFLSFVT 454
                 Q F V FL+ VT
Sbjct: 91  AITIFRQDFSVTFLAMVT 108


>ref|XP_002319894.1| predicted protein [Populus trichocarpa] gi|222858270|gb|EEE95817.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
 Frame = -3

Query: 666 PAIVYLSTSEVRLIFLLSTCLVVMYISWQLSKRFFFGSL---HVQRLTRSMSSHNRDIIS 496
           PA+VYLSTS++ L+ LL+  LV+M I WQL+KR F GSL    V+RL         +I+ 
Sbjct: 31  PAMVYLSTSKISLVLLLNMGLVIMCILWQLTKRLFLGSLREAEVERLNEQSWRELMEILF 90

Query: 495 S----HQFFPVIFLSFVT 454
           +     Q F V FL+ VT
Sbjct: 91  AITIFRQDFSVTFLAMVT 108


>ref|XP_004169788.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           synoviolin-like, partial [Cucumis sativus]
          Length = 501

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
 Frame = -3

Query: 666 PAIVYLSTSEVRLIFLLSTCLVVMYISWQLSKRFFFGSL---HVQRLTRSMSSHNRDIIS 496
           PA+VYLSTS++ L+ LL+  LV+M I WQL+K+ F GSL    V+RL         +I+ 
Sbjct: 31  PALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILF 90

Query: 495 S----HQFFPVIFLSFVT 454
           +     Q F V FL  VT
Sbjct: 91  AITIFRQDFSVAFLGMVT 108


>ref|XP_004139202.1| PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis
           sativus]
          Length = 558

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
 Frame = -3

Query: 666 PAIVYLSTSEVRLIFLLSTCLVVMYISWQLSKRFFFGSL---HVQRLTRSMSSHNRDIIS 496
           PA+VYLSTS++ L+ LL+  LV+M I WQL+K+ F GSL    V+RL         +I+ 
Sbjct: 31  PALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILF 90

Query: 495 S----HQFFPVIFLSFVT 454
           +     Q F V FL  VT
Sbjct: 91  AITIFRQDFSVAFLGMVT 108


>ref|XP_002274331.2| PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Vitis
           vinifera]
          Length = 504

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = -3

Query: 666 PAIVYLSTSEVRLIFLLSTCLVVMYISWQLSKRFFFGSLHVQRLTRSMSSHNRDIIS--- 496
           PA VYLSTS++ L+ LL+  LV+M I WQL+KR F GSL    + R      R+++    
Sbjct: 31  PATVYLSTSKISLVLLLNMGLVIMCILWQLTKRVFLGSLREAEVERLNEQSWREVMEILF 90

Query: 495 ----SHQFFPVIFLSFVT 454
                 Q F V FL+ VT
Sbjct: 91  AITIFRQDFSVTFLAMVT 108


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