BLASTX nr result

ID: Cnidium21_contig00044713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044713
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   320   2e-85
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   303   2e-80
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   298   5e-79
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   296   3e-78
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...   295   7e-78

>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
            [Vitis vinifera]
          Length = 799

 Score =  320 bits (819), Expect = 2e-85
 Identities = 150/177 (84%), Positives = 163/177 (92%)
 Frame = +2

Query: 2    FELVPQHDGTYVLLANMYATAGRWDEMAKVRKLMRDRGVKKEPGCSWIEVENSVHVFLVN 181
            FEL+PQHDGTYVLL+NMYAT GRWD++AKVRKLMRD+GVKKEPGCSWIEVEN VHVFLV+
Sbjct: 623  FELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVD 682

Query: 182  DIEHPEVQGVYEYLKELVPKMKKLGYVPDTKFALHDTESEQQENNLSTHSEKLAVVFGLL 361
            DI HPEVQ VY YL+EL  KM+KLGY+PDTKF LHD ESEQ+E  LSTHSEKLAV FGLL
Sbjct: 683  DIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLL 742

Query: 362  KLPVGATVRVFKNLRICGDCHNAFKFMSVVVGREIVVRDGKRFHHFKDGDCSCGNYW 532
            KLP+GATVRVFKNLRICGDCHNAFKFMS VV REIVVRDGKRFHHFK+G+CSCGNYW
Sbjct: 743  KLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
            predicted protein [Populus trichocarpa]
          Length = 797

 Score =  303 bits (776), Expect = 2e-80
 Identities = 139/177 (78%), Positives = 157/177 (88%)
 Frame = +2

Query: 2    FELVPQHDGTYVLLANMYATAGRWDEMAKVRKLMRDRGVKKEPGCSWIEVENSVHVFLVN 181
            FEL PQHDGTYVLL+NMYA AG+W++MAKVRKLMRDRGVKKEPGCSWIEVEN VH FLV 
Sbjct: 621  FELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVG 680

Query: 182  DIEHPEVQGVYEYLKELVPKMKKLGYVPDTKFALHDTESEQQENNLSTHSEKLAVVFGLL 361
            D  HPEV+ +Y YL++LV +M+K+GYVPDTK  LHD ES+ +E+ LSTHSEKLAV +G +
Sbjct: 681  DANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFM 740

Query: 362  KLPVGATVRVFKNLRICGDCHNAFKFMSVVVGREIVVRDGKRFHHFKDGDCSCGNYW 532
            KLP GATVRVFKNLRICGDCHNAFKFMS VVGREIVVRDGKRFHHF+DG CSCG+YW
Sbjct: 741  KLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355479792|gb|AES60995.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  298 bits (764), Expect = 5e-79
 Identities = 134/176 (76%), Positives = 159/176 (90%)
 Frame = +2

Query: 5    ELVPQHDGTYVLLANMYATAGRWDEMAKVRKLMRDRGVKKEPGCSWIEVENSVHVFLVND 184
            EL+P  DGTY++L+NMYA  G+WDE+A+VR LMR+RGVKKEPGCSW+EVEN VHVFLV+D
Sbjct: 620  ELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDD 679

Query: 185  IEHPEVQGVYEYLKELVPKMKKLGYVPDTKFALHDTESEQQENNLSTHSEKLAVVFGLLK 364
              HPEVQ VY YL++LV +MKKLGYVPDTKF LHD ESE +E++LSTHSEKLAVV+G++K
Sbjct: 680  ARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMK 739

Query: 365  LPVGATVRVFKNLRICGDCHNAFKFMSVVVGREIVVRDGKRFHHFKDGDCSCGNYW 532
            LP+GAT+RVFKNLRICGDCHNAFK++S VV REIVVRD KRFHHFK+G+CSCGNYW
Sbjct: 740  LPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Cucumis sativus] gi|449504088|ref|XP_004162249.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  296 bits (757), Expect = 3e-78
 Identities = 135/177 (76%), Positives = 155/177 (87%)
 Frame = +2

Query: 2    FELVPQHDGTYVLLANMYATAGRWDEMAKVRKLMRDRGVKKEPGCSWIEVENSVHVFLVN 181
            F+L+PQHDGTYVLL+NMYA+ GRW+++A+ RKLMRDRGVKKEP CSW EVEN VHVFLV+
Sbjct: 621  FKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVD 680

Query: 182  DIEHPEVQGVYEYLKELVPKMKKLGYVPDTKFALHDTESEQQENNLSTHSEKLAVVFGLL 361
            D  HPEV  +Y YL++L  +MKK+GY+PDTK+ LHD ESE +E  LSTHSEKLAV FGL+
Sbjct: 681  DTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLM 740

Query: 362  KLPVGATVRVFKNLRICGDCHNAFKFMSVVVGREIVVRDGKRFHHFKDGDCSCGNYW 532
            KLP GATVRVFKNLRICGDCHNA KFMS VVGREIVVRDGKRFHHFK+G+CSC NYW
Sbjct: 741  KLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like
            [Glycine max]
          Length = 782

 Score =  295 bits (754), Expect = 7e-78
 Identities = 133/176 (75%), Positives = 157/176 (89%)
 Frame = +2

Query: 5    ELVPQHDGTYVLLANMYATAGRWDEMAKVRKLMRDRGVKKEPGCSWIEVENSVHVFLVND 184
            EL+PQ DGTY+ L+NMYA  G+WDE+A+VRKLMR+RGVKKEPGCSWIEVEN VHVFLV+D
Sbjct: 607  ELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDD 666

Query: 185  IEHPEVQGVYEYLKELVPKMKKLGYVPDTKFALHDTESEQQENNLSTHSEKLAVVFGLLK 364
              HPEV  VY YL++LV +M+KLGYVPDTKF LHD ESEQ+E  LSTHSEKLAVV+G++K
Sbjct: 667  AVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMK 726

Query: 365  LPVGATVRVFKNLRICGDCHNAFKFMSVVVGREIVVRDGKRFHHFKDGDCSCGNYW 532
            LP+GAT+RVFKNLRICGDCHNAFK++S VV REI+VRD KRFHHF++G+CSC NYW
Sbjct: 727  LPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782


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