BLASTX nr result
ID: Cnidium21_contig00044690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00044690
(434 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containi... 139 2e-31
ref|XP_002525572.1| pentatricopeptide repeat-containing protein,... 130 8e-29
ref|XP_004147131.1| PREDICTED: pentatricopeptide repeat-containi... 127 9e-28
ref|XP_002886049.1| pentatricopeptide repeat-containing protein ... 103 1e-20
gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|... 100 1e-19
>ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 139 bits (350), Expect = 2e-31
Identities = 67/109 (61%), Positives = 78/109 (71%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
VV CSALL GYCR M EAN LF KML+ GL DVILYN LIHGFC GN+DDAC LVS
Sbjct: 533 VVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVS 592
Query: 254 MMVRQGIIPNDVTYQALTFGYKKNWARNPVETAALKVQQILQHYGFSTD 108
MM+ GI+PN++T+ AL GY+K NPVE AA K+QQ+L YG +
Sbjct: 593 MMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLLLKYGIQAE 641
Score = 63.2 bits (152), Expect = 2e-08
Identities = 41/110 (37%), Positives = 56/110 (50%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
V + L+ C+ ME A LF +M+ GLVPDV+ YN L++G+ G++ A L+S
Sbjct: 393 VATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLS 452
Query: 254 MMVRQGIIPNDVTYQALTFGYKKNWARNPVETAALKVQQILQHYGFSTDV 105
MM G+ P+ VTY L G K N A + L GFS DV
Sbjct: 453 MMRSAGVSPDLVTYNILIHGLIKRGLVN----EAKDILDELTRRGFSPDV 498
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = -1
Query: 422 SALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVSMMVR 243
+ ++ GYC+V + A KML G+ P V Y +LI C GNM+ A L M+
Sbjct: 362 TTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMIT 421
Query: 242 QGIIPNDVTYQALTFGYKK 186
+G++P+ V+Y L GY K
Sbjct: 422 EGLVPDVVSYNTLMNGYGK 440
>ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535151|gb|EEF36831.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 687
Score = 130 bits (328), Expect = 8e-29
Identities = 61/110 (55%), Positives = 80/110 (72%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
VV CSALL GYCR M+EAN+LFLKML+ GL PD++LYN LIHGFC +GNM+ AC LV+
Sbjct: 566 VVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVA 625
Query: 254 MMVRQGIIPNDVTYQALTFGYKKNWARNPVETAALKVQQILQHYGFSTDV 105
MM+ G +PN T++A G++K W +NP A+LK++QIL + DV
Sbjct: 626 MMIDDGFLPNITTHRAFALGFEKKWVKNPELHASLKLKQILLTHSTCLDV 675
Score = 56.6 bits (135), Expect = 2e-06
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = -1
Query: 416 LLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVSMMVRQG 237
++ GYC+V + +A +ML G+ P V Y +LI+ C SG+M A L+ M+ +G
Sbjct: 397 IIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEG 456
Query: 236 IIPNDVTYQALTFGY-KKNWARNPVETAALKVQQILQHYGFSTD 108
+IP+ VT+ L G+ KK + + A ++ I++ G S D
Sbjct: 457 LIPDVVTFNCLIDGFGKKGYLQK-----AFELLDIMRSAGMSPD 495
>ref|XP_004147131.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
gi|449503522|ref|XP_004162044.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g19280-like [Cucumis sativus]
Length = 532
Score = 127 bits (319), Expect = 9e-28
Identities = 60/109 (55%), Positives = 78/109 (71%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
VV CSALL GYCR M+EAN+LF KML+IGL PD+ILYN LIHGFC GN+D+ C LV
Sbjct: 419 VVTCSALLSGYCREKRMDEANALFCKMLDIGLKPDLILYNTLIHGFCSVGNVDEGCNLVK 478
Query: 254 MMVRQGIIPNDVTYQALTFGYKKNWARNPVETAALKVQQILQHYGFSTD 108
M+ IIPN+VT++AL G++K +P+++A K+Q+IL Y D
Sbjct: 479 KMIESSIIPNNVTHRALVLGFQKKRVTDPIQSATSKLQEILIAYDLQID 527
>ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331889|gb|EFH62308.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 755
Score = 103 bits (257), Expect = 1e-20
Identities = 48/101 (47%), Positives = 72/101 (71%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
VV CSALL+GYCR ME+A LF K+L+ GL PDV+LYN LIHG+C G+++ AC L+
Sbjct: 650 VVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 709
Query: 254 MMVRQGIIPNDVTYQALTFGYKKNWARNPVETAALKVQQIL 132
+MV++G++PN+ T+ AL G + N E A++ +++I+
Sbjct: 710 LMVQRGMLPNESTHHALVVGLEGKRFMNSEEHASMLLEEIV 750
Score = 59.3 bits (142), Expect = 3e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
VV + L+YGY + H + + L +M + G+ PDV YN+LIH G +D+A ++S
Sbjct: 545 VVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIIS 604
Query: 254 MMVRQGIIPNDVTYQALTFGYKK 186
++R+G +P+ + + + G K
Sbjct: 605 ELIRRGFVPSALAFTDVIGGLSK 627
>gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|BAD94048.1|
putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible
protein [Arabidopsis thaliana]
Length = 693
Score = 100 bits (249), Expect = 1e-19
Identities = 46/101 (45%), Positives = 71/101 (70%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
VV CSALL+GYC+ ME+A LF K+L+ GL PDV+LYN LIHG+C G+++ AC L+
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 254 MMVRQGIIPNDVTYQALTFGYKKNWARNPVETAALKVQQIL 132
+MV++G++PN+ T+ AL G + N A++ +++I+
Sbjct: 643 LMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEII 683
Score = 59.3 bits (142), Expect = 3e-07
Identities = 26/83 (31%), Positives = 49/83 (59%)
Frame = -1
Query: 434 VVMCSALLYGYCRVHLMEEANSLFLKMLNIGLVPDVILYNMLIHGFCYSGNMDDACRLVS 255
VV + L++GY + H + + L +M + G+ PDV YN+LIH G +D+A ++S
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 254 MMVRQGIIPNDVTYQALTFGYKK 186
++R+G +P+ + + + G+ K
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSK 560