BLASTX nr result

ID: Cnidium21_contig00044672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044672
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    61   1e-07
ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|222871560|gb|EEF08691.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/56 (42%), Positives = 39/56 (69%)
 Frame = +2

Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSSEVLIIHQVRN 289
           LP+ L+ +I+SR P++TI+ C+CVCK W + +S+ +F  LHL RS   L++  + N
Sbjct: 28  LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLVKTISN 83


>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 24/56 (42%), Positives = 39/56 (69%)
 Frame = +2

Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSSEVLIIHQVRN 289
           LP+ L+ +I+SR P++TI+ C+CVCK W + +S+ +F  LHL RS   L++  + N
Sbjct: 28  LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLVKTISN 83


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/46 (52%), Positives = 37/46 (80%)
 Frame = +2

Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSS 259
           LP +++AEI+SR PVR+++  KCVCK W  I+S+P F+ +HL+RS+
Sbjct: 94  LPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSA 139


>ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|222873401|gb|EEF10532.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/56 (42%), Positives = 39/56 (69%)
 Frame = +2

Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSSEVLIIHQVRN 289
           LP+ L+ +I+SR P++TI+ C+CVCK W + +S+ +F  LHL RS   L++  + N
Sbjct: 28  LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLLKTISN 83


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +2

Query: 110 STMDLPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRS--SEVLIIHQV 283
           ST  LPA++  +I+SR PV  +  CK VCK WR++LS PYF  LH +++  S +L  H  
Sbjct: 20  STPTLPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLSTPYFARLHFAKAKPSSLLFCHCS 79

Query: 284 RNR 292
            N+
Sbjct: 80  GNK 82


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