BLASTX nr result
ID: Cnidium21_contig00044672
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00044672 (479 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_003621771.1| F-box family protein [Medicago truncatula] g... 61 1e-07 ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 >ref|XP_002330356.1| predicted protein [Populus trichocarpa] gi|222871560|gb|EEF08691.1| predicted protein [Populus trichocarpa] Length = 297 Score = 61.2 bits (147), Expect = 8e-08 Identities = 24/56 (42%), Positives = 39/56 (69%) Frame = +2 Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSSEVLIIHQVRN 289 LP+ L+ +I+SR P++TI+ C+CVCK W + +S+ +F LHL RS L++ + N Sbjct: 28 LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLVKTISN 83 >ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1| predicted protein [Populus trichocarpa] Length = 452 Score = 61.2 bits (147), Expect = 8e-08 Identities = 24/56 (42%), Positives = 39/56 (69%) Frame = +2 Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSSEVLIIHQVRN 289 LP+ L+ +I+SR P++TI+ C+CVCK W + +S+ +F LHL RS L++ + N Sbjct: 28 LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLVKTISN 83 >ref|XP_003621771.1| F-box family protein [Medicago truncatula] gi|355496786|gb|AES77989.1| F-box family protein [Medicago truncatula] Length = 524 Score = 60.8 bits (146), Expect = 1e-07 Identities = 24/46 (52%), Positives = 37/46 (80%) Frame = +2 Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSS 259 LP +++AEI+SR PVR+++ KCVCK W I+S+P F+ +HL+RS+ Sbjct: 94 LPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSA 139 >ref|XP_002334596.1| predicted protein [Populus trichocarpa] gi|222873401|gb|EEF10532.1| predicted protein [Populus trichocarpa] Length = 255 Score = 60.8 bits (146), Expect = 1e-07 Identities = 24/56 (42%), Positives = 39/56 (69%) Frame = +2 Query: 122 LPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRSSEVLIIHQVRN 289 LP+ L+ +I+SR P++TI+ C+CVCK W + +S+ +F LHL RS L++ + N Sbjct: 28 LPSCLIMDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPTSLLLKTISN 83 >ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1| predicted protein [Populus trichocarpa] Length = 391 Score = 60.5 bits (145), Expect = 1e-07 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Frame = +2 Query: 110 STMDLPADLLAEIISRTPVRTIVYCKCVCKLWRNILSEPYFVDLHLSRS--SEVLIIHQV 283 ST LPA++ +I+SR PV + CK VCK WR++LS PYF LH +++ S +L H Sbjct: 20 STPTLPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLSTPYFARLHFAKAKPSSLLFCHCS 79 Query: 284 RNR 292 N+ Sbjct: 80 GNK 82