BLASTX nr result

ID: Cnidium21_contig00044669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044669
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78298.1| hypothetical protein VITISV_004663 [Vitis vinifera]    74   2e-11
ref|XP_003600257.1| ABI3-interacting protein [Medicago truncatul...    68   9e-10
ref|XP_003518541.1| PREDICTED: protein FRIGIDA-like [Glycine max]      67   1e-09
ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]...    64   1e-08
ref|NP_174463.1| protein FRIGIDA like 2 [Arabidopsis thaliana] g...    57   2e-06

>emb|CAN78298.1| hypothetical protein VITISV_004663 [Vitis vinifera]
          Length = 449

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 47/127 (37%), Positives = 60/127 (47%)
 Frame = -3

Query: 386 ISAAMKLIDVKKQNLKKAFEDLQXXXXXXXXXXXXXXHIDSHFNSLHSSLQHKXXXXXXX 207
           I+  + LID KK+ L+ AFEDLQ               IDSHF+S+ SSL  +       
Sbjct: 217 IALGLTLIDEKKEELRIAFEDLQAHSSSPSSFTLTWSDIDSHFSSIQSSLTRQFDLIQCQ 276

Query: 206 XXXXXXXXXXXXXXSIPPKSGTATARPKLKSLCQNMDAIGLRNYIINHPRERDSIRLELA 27
                          +PP      + P+LK LC NMDA GL  YII+H ++R  I  EL 
Sbjct: 277 NDVVPEILQKY----VPP------SHPRLKLLCSNMDANGLTRYIIDHSKDRQEIASELP 326

Query: 26  DAFASCP 6
           DAF   P
Sbjct: 327 DAFRVAP 333


>ref|XP_003600257.1| ABI3-interacting protein [Medicago truncatula]
           gi|355489305|gb|AES70508.1| ABI3-interacting protein
           [Medicago truncatula]
          Length = 525

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
 Frame = -3

Query: 386 ISAAMKLIDVKKQNLKKAFEDLQXXXXXXXXXXXXXXHIDSHFNSLHSSLQHKXXXXXXX 207
           IS+A+ LID KKQNLK AFE+LQ               +DSHF SL  SL H+       
Sbjct: 8   ISSALNLIDSKKQNLKIAFENLQSKSSSLPLSWLQ---LDSHFTSLQQSLTHRFQFLQSL 64

Query: 206 XXXXXXXXXXXXXXSIPPKSGTATARPK--------LKSLCQNMDAIGLRNYIINHPRER 51
                         +   K    +  PK        L+ LC+ +D IGLRNYI  + +++
Sbjct: 65  EQQSQSRTLISNSNAETSKKTNFSTNPKDPISHRKELRVLCEKIDGIGLRNYIDKNYKDK 124

Query: 50  DSIRLELADAFASCPD 3
             +  EL + F S PD
Sbjct: 125 IRVEAELLEEFRSAPD 140


>ref|XP_003518541.1| PREDICTED: protein FRIGIDA-like [Glycine max]
          Length = 519

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
 Frame = -3

Query: 386 ISAAMKLIDVKKQNLKKAFEDLQ-XXXXXXXXXXXXXXHIDSHFNSLHSSLQHK------ 228
           ISAA+KL D KK+NLKKA+ DLQ               H+D+HF SLH+SL H+      
Sbjct: 7   ISAALKLFDAKKENLKKAYYDLQSHSSLLAPSFSLSWSHLDAHFTSLHTSLSHRFHLLQS 66

Query: 227 XXXXXXXXXXXXXXXXXXXXXSIPPKSGTATARPK-----LKSLCQNMDAIGLRNYIINH 63
                                   P S   TA PK     + +LC NMD  GLR+Y+ +H
Sbjct: 67  LESQQQYPPSSPSKYLSFPPSPTDPSSQNGTALPKNPSEQILTLCNNMDGKGLRDYVGDH 126

Query: 62  PRERDSIRLELADAFASCPD 3
            +++ +I   L  A  S  D
Sbjct: 127 LKDKAAIEDTLRSALKSASD 146


>ref|XP_002529047.1| Protein FRIGIDA, putative [Ricinus communis]
           gi|223531527|gb|EEF33358.1| Protein FRIGIDA, putative
           [Ricinus communis]
          Length = 491

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/119 (32%), Positives = 54/119 (45%)
 Frame = -3

Query: 386 ISAAMKLIDVKKQNLKKAFEDLQXXXXXXXXXXXXXXHIDSHFNSLHSSLQHKXXXXXXX 207
           I +A+ LID+KKQ LK+A++DLQ               +DSHF S+ ++L  +       
Sbjct: 15  IESALNLIDIKKQTLKRAYDDLQSHSSLLSSFSLSWSDLDSHFTSVQTALTRRFLRLQST 74

Query: 206 XXXXXXXXXXXXXXSIPPKSGTATARPKLKSLCQNMDAIGLRNYIINHPRERDSIRLEL 30
                           P        R  L   C+ MD  GLR+YI  H RER++IR EL
Sbjct: 75  RPGPETVQ--------PEPVQDNPTRKALVPFCEKMDGRGLRDYISEHSREREAIRAEL 125


>ref|NP_174463.1| protein FRIGIDA like 2 [Arabidopsis thaliana]
           gi|12321290|gb|AAG50711.1|AC079041_4 hypothetical
           protein [Arabidopsis thaliana]
           gi|46518467|gb|AAS99715.1| At1g31814 [Arabidopsis
           thaliana] gi|46810271|tpg|DAA05286.1| TPA_exp: flowering
           time protein [Arabidopsis thaliana]
           gi|110741732|dbj|BAE98812.1| hypothetical protein
           [Arabidopsis thaliana] gi|332193276|gb|AEE31397.1|
           protein FRIGIDA like 2 [Arabidopsis thaliana]
          Length = 473

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
 Frame = -3

Query: 386 ISAAMKLIDVKKQNLKKAFEDLQXXXXXXXXXXXXXXH-IDSHFNSLHSSLQHKXXXXXX 210
           I+A++  ID KKQ LKKAF+DLQ                IDSHF+SL SSL ++      
Sbjct: 7   IAASINQIDEKKQKLKKAFDDLQAHRSLLSPSFNLSWSEIDSHFSSLQSSLFNRLQSAVT 66

Query: 209 XXXXXXXXXXXXXXXSIPPKSGTATARPKLKSLCQNMDAIGLRNYIINHPRERDSIRLEL 30
                            P         P+L+  C+  D  GL NY+I + R+R SI  EL
Sbjct: 67  SSNSGNIETPTAVTTETP------VLWPELRKFCEKNDGKGLGNYMIENSRKRLSINEEL 120

Query: 29  ADA 21
            +A
Sbjct: 121 PNA 123


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