BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044628
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533783.1| pentatricopeptide repeat-containing protein,...    65   7e-09
ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
emb|CBI31086.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|NP_193861.1| pentatricopeptide repeat-containing protein [Ar...    62   5e-08
ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526284|gb|EEF28596.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = -2

Query: 407 HMFVAAHTSHSYVAEIYFILNHLLLELRKEGYVPQPYLPLHMES 276
           HMFVAA  SH   A+IY +LN+LLLELRKEGY P+PYLP+H ++
Sbjct: 626 HMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPKPYLPMHPQT 669


>ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = -2

Query: 407 HMFVAAHTSHSYVAEIYFILNHLLLELRKEGYVPQPYLPLH 285
           HMF AA  +H    EIY ILN LLLELRK+GYVPQPYLPLH
Sbjct: 799 HMFSAAEGNHPESVEIYLILNSLLLELRKQGYVPQPYLPLH 839


>emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
 Frame = -2

Query: 407 HMFVAAHTSHSYVAEIYFILNHLLLELRKEGYVPQPYLPLH-----MESSKLTYLHN 252
           HMFVAA  SH   ++IY +L +L LELRKEGYVPQ YLP+H     + + +++Y H+
Sbjct: 702 HMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLPMHPQTMGLHNGRISYYHS 758


>ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g21300 gi|3402749|emb|CAA20195.1| putative protein
           [Arabidopsis thaliana] gi|7268926|emb|CAB79129.1|
           putative protein [Arabidopsis thaliana]
           gi|332659037|gb|AEE84437.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/49 (57%), Positives = 35/49 (71%)
 Frame = -2

Query: 407 HMFVAAHTSHSYVAEIYFILNHLLLELRKEGYVPQPYLPLHMESSKLTY 261
           H+FV+   +H   + IY +LN LL ELR EGY+PQPYLPLH ESS+  Y
Sbjct: 793 HLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLHPESSRKVY 841


>ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = -2

Query: 407 HMFVAAHTSHSYVAEIYFILNHLLLELRKEGYVPQPYLPLH 285
           HMF AA  +H    EIY IL  LLLELRK+GYVPQPYLPLH
Sbjct: 766 HMFSAADGNHPESVEIYLILKSLLLELRKQGYVPQPYLPLH 806