BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044612
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,...   125   5e-27
ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|2...   124   7e-27

>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
           gi|147852271|emb|CAN82234.1| hypothetical protein
           VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  144 bits (364), Expect = 6e-33
 Identities = 65/108 (60%), Positives = 82/108 (75%)
 Frame = +3

Query: 213 MSALMNLVSPIVSPSVEQTRMCSGFSLQIPHVHSFGVTKGFSRVLAATHMAIPSKDTVFT 392
           M+ L+N +SPI SPS E  R   GF  Q+P++H+  + KGFSRVLA+T + I  KD VFT
Sbjct: 1   MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT 60

Query: 393 IPNWRYGKNDARSKDYRLNDAFLYMEYMVGKGHTPDVGHANQLLYDLC 536
           +PNWR GKND R++D RLNDAFLY+EYM+GKGH PD G A QL+Y+LC
Sbjct: 61  LPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELC 108


>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  128 bits (322), Expect = 5e-28
 Identities = 60/108 (55%), Positives = 77/108 (71%)
 Frame = +3

Query: 213 MSALMNLVSPIVSPSVEQTRMCSGFSLQIPHVHSFGVTKGFSRVLAATHMAIPSKDTVFT 392
           M+ L+N VSPI +PS E TR   GF   IP++    + KGFS+VLA+T + I  KDT+FT
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 393 IPNWRYGKNDARSKDYRLNDAFLYMEYMVGKGHTPDVGHANQLLYDLC 536
           +PNW+ GK D +SK+ RLNDAF ++E+MV KG  PDV  A QLLYDLC
Sbjct: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLC 108


>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  128 bits (322), Expect = 5e-28
 Identities = 60/108 (55%), Positives = 77/108 (71%)
 Frame = +3

Query: 213 MSALMNLVSPIVSPSVEQTRMCSGFSLQIPHVHSFGVTKGFSRVLAATHMAIPSKDTVFT 392
           M+ L+N VSPI +PS E TR   GF   IP++    + KGFS+VLA+T + I  KDT+FT
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 393 IPNWRYGKNDARSKDYRLNDAFLYMEYMVGKGHTPDVGHANQLLYDLC 536
           +PNW+ GK D +SK+ RLNDAF ++E+MV KG  PDV  A QLLYDLC
Sbjct: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLC 108


>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/108 (51%), Positives = 79/108 (73%)
 Frame = +3

Query: 213 MSALMNLVSPIVSPSVEQTRMCSGFSLQIPHVHSFGVTKGFSRVLAATHMAIPSKDTVFT 392
           M++L++ VSP+ +P  E  R+  GF   IP++HSF + K F+RVLA+T + I  KD+V T
Sbjct: 1   MASLVHSVSPLTNPFTEAARIACGFFSHIPNLHSFSLNKDFTRVLASTQITISPKDSVIT 60

Query: 393 IPNWRYGKNDARSKDYRLNDAFLYMEYMVGKGHTPDVGHANQLLYDLC 536
           +PNWR GKND R++D R++DAF ++E++V  GH PDV  A QLLYDLC
Sbjct: 61  LPNWRSGKNDQRNRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLC 108


>ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|222847803|gb|EEE85350.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  124 bits (312), Expect = 7e-27
 Identities = 56/108 (51%), Positives = 76/108 (70%)
 Frame = +3

Query: 213 MSALMNLVSPIVSPSVEQTRMCSGFSLQIPHVHSFGVTKGFSRVLAATHMAIPSKDTVFT 392
           M+ L+N VSP+ +PS E  R   G    +P+  SF   KGF+RVLA+TH+ I  KD+V+T
Sbjct: 1   MATLVNSVSPLTNPSPETLRTACGLFSNVPNFRSFSQNKGFTRVLASTHITISPKDSVWT 60

Query: 393 IPNWRYGKNDARSKDYRLNDAFLYMEYMVGKGHTPDVGHANQLLYDLC 536
           + NW+ G+ D R++D RLNDAF ++E++V KGH PDV  A QLLYDLC
Sbjct: 61  LSNWKVGRKDTRNRDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLC 108