BLASTX nr result

ID: Cnidium21_contig00044599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044599
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
emb|CBI27939.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|NP_001043491.2| Os01g0600400 [Oryza sativa Japonica Group] g...   137   7e-31
gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indi...   137   7e-31

>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/120 (55%), Positives = 92/120 (76%)
 Frame = +1

Query: 1    GMDSHDTISYNTLICQYANHRQGEKALEAFKNMLDKCVSPDGVTFLGILSACRYMGLVEE 180
            G+ S DT+S+NT+IC Y+ H QG KAL+AF+ MLD+   PD VTF+G+LSAC +MGL+EE
Sbjct: 693  GLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEE 752

Query: 181  GQKTFYAMSEVYGIIPSIKHYACMVDILARLGRHGEVESFIQQMNVPPDASVRNSVLSVC 360
            G+K F ++S++YGI P+I+HYACMVDIL R G+  EVESFI++M +  +  +  +VL  C
Sbjct: 753  GKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGAC 812


>emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/120 (55%), Positives = 92/120 (76%)
 Frame = +1

Query: 1   GMDSHDTISYNTLICQYANHRQGEKALEAFKNMLDKCVSPDGVTFLGILSACRYMGLVEE 180
           G+ S DT+S+NT+IC Y+ H QG KAL+AF+ MLD+   PD VTF+G+LSAC +MGL+EE
Sbjct: 452 GLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEE 511

Query: 181 GQKTFYAMSEVYGIIPSIKHYACMVDILARLGRHGEVESFIQQMNVPPDASVRNSVLSVC 360
           G+K F ++S++YGI P+I+HYACMVDIL R G+  EVESFI++M +  +  +  +VL  C
Sbjct: 512 GKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGAC 571


>ref|XP_002330519.1| predicted protein [Populus trichocarpa] gi|222872453|gb|EEF09584.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/120 (55%), Positives = 91/120 (75%)
 Frame = +1

Query: 1   GMDSHDTISYNTLICQYANHRQGEKALEAFKNMLDKCVSPDGVTFLGILSACRYMGLVEE 180
           G+ S D +S+NT+I  Y+ H QGEKALEAF+ ML + + PD  TF+G+LSAC +MGLVEE
Sbjct: 414 GLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEE 473

Query: 181 GQKTFYAMSEVYGIIPSIKHYACMVDILARLGRHGEVESFIQQMNVPPDASVRNSVLSVC 360
           G+K F +MS++YGI PSI+HYACMVDIL R G+  EV+ FI++MN+ P + +  +VL  C
Sbjct: 474 GKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGAC 533


>ref|NP_001043491.2| Os01g0600400 [Oryza sativa Japonica Group]
           gi|53791399|dbj|BAD53436.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|53793537|dbj|BAD52986.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|222618803|gb|EEE54935.1| hypothetical
           protein OsJ_02490 [Oryza sativa Japonica Group]
           gi|255673429|dbj|BAF05405.2| Os01g0600400 [Oryza sativa
           Japonica Group]
          Length = 348

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/118 (51%), Positives = 87/118 (73%)
 Frame = +1

Query: 7   DSHDTISYNTLICQYANHRQGEKALEAFKNMLDKCVSPDGVTFLGILSACRYMGLVEEGQ 186
           D+HD + +NT+IC YA H  G KALEAF+ M+D+   PD +TF+G+LSAC + GL++EG+
Sbjct: 149 DTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGR 208

Query: 187 KTFYAMSEVYGIIPSIKHYACMVDILARLGRHGEVESFIQQMNVPPDASVRNSVLSVC 360
           + F  +S VYGI P+++HYACMVDILA+ G+  E ES I +M + PDAS+  ++L  C
Sbjct: 209 RYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGAC 266


>gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/118 (51%), Positives = 87/118 (73%)
 Frame = +1

Query: 7   DSHDTISYNTLICQYANHRQGEKALEAFKNMLDKCVSPDGVTFLGILSACRYMGLVEEGQ 186
           D+HD + +NT+IC YA H  G KALEAF+ M+D+   PD +TF+G+LSAC + GL++EG+
Sbjct: 626 DTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGR 685

Query: 187 KTFYAMSEVYGIIPSIKHYACMVDILARLGRHGEVESFIQQMNVPPDASVRNSVLSVC 360
           + F  +S VYGI P+++HYACMVDILA+ G+  E ES I +M + PDAS+  ++L  C
Sbjct: 686 RYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGAC 743


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