BLASTX nr result

ID: Cnidium21_contig00044570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044570
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   244   5e-63
emb|CBI37746.3| unnamed protein product [Vitis vinifera]              243   2e-62
ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   242   3e-62
ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   240   8e-62
ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana...   240   8e-62

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  244 bits (623), Expect = 5e-63
 Identities = 110/136 (80%), Positives = 123/136 (90%)
 Frame = +1

Query: 4   RHSVDYCAMYDICGARSDDKVLNCPFGSPAVQPSELFSSKIQSLCPTITGNVCCTEKQFD 183
           RHS +YCAMYDICG RSD KVLNCP+GSP+V+P +L SSKIQS+CPTI+GNVCCTE QFD
Sbjct: 60  RHSEEYCAMYDICGKRSDGKVLNCPYGSPSVKPDDLLSSKIQSMCPTISGNVCCTEAQFD 119

Query: 184 TLRAQVQQAVPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSISKAKNNSTVDGIDFY 363
           TLR QVQQA+PFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS+SK  NN TVDGI+F 
Sbjct: 120 TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVNNNLTVDGIEFI 179

Query: 364 VDDAFGKGLFESCKDV 411
           + DAFG+GL+ SCKDV
Sbjct: 180 ITDAFGEGLYNSCKDV 195


>emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  243 bits (619), Expect = 2e-62
 Identities = 111/136 (81%), Positives = 123/136 (90%)
 Frame = +1

Query: 4    RHSVDYCAMYDICGARSDDKVLNCPFGSPAVQPSELFSSKIQSLCPTITGNVCCTEKQFD 183
            RHS +YCAMYDICG RSD KVLNCP+G+PAV+P E  S+KIQSLCP I+GNVCCTE QFD
Sbjct: 849  RHSPEYCAMYDICGERSDGKVLNCPYGTPAVKPDEFLSAKIQSLCPMISGNVCCTEAQFD 908

Query: 184  TLRAQVQQAVPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSISKAKNNSTVDGIDFY 363
            TLRAQVQQA+PFLVGCPACLRNFLNLFCEL+CSPNQSLFINVTSI+K   +STVDGIDFY
Sbjct: 909  TLRAQVQQAIPFLVGCPACLRNFLNLFCELSCSPNQSLFINVTSIAKGNCSSTVDGIDFY 968

Query: 364  VDDAFGKGLFESCKDV 411
            V DAFG+GL+ SCKDV
Sbjct: 969  VSDAFGEGLYNSCKDV 984


>ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1283

 Score =  242 bits (617), Expect = 3e-62
 Identities = 110/136 (80%), Positives = 121/136 (88%)
 Frame = +1

Query: 4   RHSVDYCAMYDICGARSDDKVLNCPFGSPAVQPSELFSSKIQSLCPTITGNVCCTEKQFD 183
           RHS DYCAMYDICG RSD KV+NCP GSPAV+P +L SSKIQSLCPTITGNVCCTE QF+
Sbjct: 38  RHSEDYCAMYDICGTRSDGKVVNCPHGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFE 97

Query: 184 TLRAQVQQAVPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSISKAKNNSTVDGIDFY 363
           TLR QVQQA+PFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS+     NSTV GID++
Sbjct: 98  TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDNVSGNSTVGGIDYF 157

Query: 364 VDDAFGKGLFESCKDV 411
           V DAFG+GL+ESCK+V
Sbjct: 158 VTDAFGEGLYESCKEV 173


>ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1257

 Score =  240 bits (613), Expect = 8e-62
 Identities = 109/136 (80%), Positives = 121/136 (88%)
 Frame = +1

Query: 4   RHSVDYCAMYDICGARSDDKVLNCPFGSPAVQPSELFSSKIQSLCPTITGNVCCTEKQFD 183
           RHS DYCAMYDICG RSD KV+NCP+GSPAV+P +L SSKIQSLCPTITGNVCCTE QF+
Sbjct: 12  RHSEDYCAMYDICGTRSDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFE 71

Query: 184 TLRAQVQQAVPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSISKAKNNSTVDGIDFY 363
           TLR QVQQA+PFLVGCPACLRNFLNLFCELTCSPNQSLFINVTS+     N TV GID++
Sbjct: 72  TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDNVGGNLTVGGIDYF 131

Query: 364 VDDAFGKGLFESCKDV 411
           V DAFG+GL+ESCK+V
Sbjct: 132 VTDAFGEGLYESCKEV 147


>ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana]
           gi|332661517|gb|AEE86917.1| Patched family protein
           [Arabidopsis thaliana]
          Length = 1297

 Score =  240 bits (613), Expect = 8e-62
 Identities = 107/136 (78%), Positives = 124/136 (91%)
 Frame = +1

Query: 4   RHSVDYCAMYDICGARSDDKVLNCPFGSPAVQPSELFSSKIQSLCPTITGNVCCTEKQFD 183
           RHS +YCAMYDICG RSD KVLNCP+ SP++QP ELFS+KIQSLCPTI+GNVCCTE QFD
Sbjct: 32  RHSKEYCAMYDICGHRSDGKVLNCPYASPSIQPDELFSAKIQSLCPTISGNVCCTETQFD 91

Query: 184 TLRAQVQQAVPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSISKAKNNSTVDGIDFY 363
           TLR+QVQQAVPFLVGCPACLRNFLNLFCEL+CSPNQSLFINVTS+++   N TVDGID++
Sbjct: 92  TLRSQVQQAVPFLVGCPACLRNFLNLFCELSCSPNQSLFINVTSVAEVSGNLTVDGIDYH 151

Query: 364 VDDAFGKGLFESCKDV 411
           + D FG+GL+ESCK+V
Sbjct: 152 ITDTFGEGLYESCKEV 167


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