BLASTX nr result

ID: Cnidium21_contig00044566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044566
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812...    67   2e-09
ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|35549...    63   2e-08
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    63   3e-08
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    61   8e-08
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812622 [Glycine max]
          Length = 975

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = +3

Query: 63  LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRNNKVILS-NSYN 239
           LP +LI EIL   PVK L+R RCVSK+WY+LI HPSFIKLHL   L +N  V+L+ ++Y 
Sbjct: 9   LPQELIVEILSWLPVKPLMRFRCVSKAWYSLIFHPSFIKLHL-QRLPKNTHVLLTFDNYE 67

Query: 240 PVADF 254
            V  F
Sbjct: 68  CVTCF 72


>ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|355499008|gb|AES80211.1|
           F-box protein [Medicago truncatula]
          Length = 445

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/85 (44%), Positives = 51/85 (60%)
 Frame = +3

Query: 63  LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRNNKVILSNSYNP 242
           LP DLIAE+L   PVK+LVR +CVSKSW +LI  PSF+KLHL       N+   S++ NP
Sbjct: 9   LPDDLIAELLSFLPVKSLVRLKCVSKSWKSLISDPSFVKLHL-------NR---SSTRNP 58

Query: 243 VADFGLKRIISVHGINDPPLTVLPI 317
           +   G   I ++      P+  +PI
Sbjct: 59  LFTIGTLHIAAI------PIAAIPI 77


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = +3

Query: 63  LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRN 209
           LP+D+I EI+CR PVK ++R RCV KSW +LI  P F+K  LC + +RN
Sbjct: 29  LPSDVIPEIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQLCVSTTRN 77


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = +3

Query: 63  LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRN 209
           LP+D+I EI+CR PVK ++R +CV KSW +LI  P F+K  LC + +RN
Sbjct: 29  LPSDVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTRN 77


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +3

Query: 63  LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHL 188
           LP+++I+EIL R PVK LVR +CVSK+W +LI HP F+K HL
Sbjct: 8   LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHL 49


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