BLASTX nr result
ID: Cnidium21_contig00044566
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00044566 (319 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812... 67 2e-09 ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|35549... 63 2e-08 ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat... 63 3e-08 ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548... 61 8e-08 ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 >ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812622 [Glycine max] Length = 975 Score = 67.0 bits (162), Expect = 2e-09 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Frame = +3 Query: 63 LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRNNKVILS-NSYN 239 LP +LI EIL PVK L+R RCVSK+WY+LI HPSFIKLHL L +N V+L+ ++Y Sbjct: 9 LPQELIVEILSWLPVKPLMRFRCVSKAWYSLIFHPSFIKLHL-QRLPKNTHVLLTFDNYE 67 Query: 240 PVADF 254 V F Sbjct: 68 CVTCF 72 >ref|XP_003623993.1| F-box protein [Medicago truncatula] gi|355499008|gb|AES80211.1| F-box protein [Medicago truncatula] Length = 445 Score = 63.2 bits (152), Expect = 2e-08 Identities = 38/85 (44%), Positives = 51/85 (60%) Frame = +3 Query: 63 LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRNNKVILSNSYNP 242 LP DLIAE+L PVK+LVR +CVSKSW +LI PSF+KLHL N+ S++ NP Sbjct: 9 LPDDLIAELLSFLPVKSLVRLKCVSKSWKSLISDPSFVKLHL-------NR---SSTRNP 58 Query: 243 VADFGLKRIISVHGINDPPLTVLPI 317 + G I ++ P+ +PI Sbjct: 59 LFTIGTLHIAAI------PIAAIPI 77 >ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 382 Score = 62.8 bits (151), Expect = 3e-08 Identities = 27/49 (55%), Positives = 36/49 (73%) Frame = +3 Query: 63 LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRN 209 LP+D+I EI+CR PVK ++R RCV KSW +LI P F+K LC + +RN Sbjct: 29 LPSDVIPEIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQLCVSTTRN 77 >ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1| F-box protein [Medicago truncatula] Length = 382 Score = 61.2 bits (147), Expect = 8e-08 Identities = 26/49 (53%), Positives = 36/49 (73%) Frame = +3 Query: 63 LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHLCFNLSRN 209 LP+D+I EI+CR PVK ++R +CV KSW +LI P F+K LC + +RN Sbjct: 29 LPSDVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTRN 77 >ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1| predicted protein [Populus trichocarpa] Length = 374 Score = 59.7 bits (143), Expect = 2e-07 Identities = 26/42 (61%), Positives = 34/42 (80%) Frame = +3 Query: 63 LPADLIAEILCRTPVKTLVRSRCVSKSWYALIHHPSFIKLHL 188 LP+++I+EIL R PVK LVR +CVSK+W +LI HP F+K HL Sbjct: 8 LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHL 49