BLASTX nr result

ID: Cnidium21_contig00044561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044561
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [C...   104   6e-21
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...    96   2e-18
ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...    89   5e-16
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    87   1e-15
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    77   2e-12

>gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [Carica papaya]
          Length = 409

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
 Frame = +2

Query: 14  EVNCNARYYVHGVIEXXXXXXXXXXXXGGKDGKGSSL----VCGFLTKVLVCECKLCSSS 181
           E N    Y+VHG +E            G  +  G S     + GFL +++ CEC LC+S 
Sbjct: 174 EYNSKHSYFVHGTLESISPVSVVPCSFGKSNKVGDSSAPVNIRGFLVRIIACECNLCASR 233

Query: 182 DPGRVLCGVHERHTIDSFTKSFIVYFYDFASCWHPVVSRLVGNYVSLTGLKKKLIFIGKE 361
           +   VL     RH   SFTK   +YF   ASCWHPV+++LVG  V L+ LKKKLIF+GK+
Sbjct: 234 ELMAVLHDSTFRH---SFTKPLFIYFCGSASCWHPVITKLVGGVVLLSRLKKKLIFMGKD 290

Query: 362 ESQLMYVT 385
           ESQLM+VT
Sbjct: 291 ESQLMFVT 298


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
           gi|223550977|gb|EEF52463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1159

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/123 (42%), Positives = 68/123 (55%)
 Frame = +2

Query: 14  EVNCNARYYVHGVIEXXXXXXXXXXXXGGKDGKGSSLVCGFLTKVLVCECKLCSSSDPGR 193
           E    ARY +HG IE            G    K    + GF+ ++ VCECKLC S +P  
Sbjct: 170 EDRLKARYRLHGPIESISPVSIVPCSVGANKSKN---LRGFIAQIRVCECKLCISKEP-- 224

Query: 194 VLCGVHERHTIDSFTKSFIVYFYDFASCWHPVVSRLVGNYVSLTGLKKKLIFIGKEESQL 373
               +        FTK   VYF+  +  WHPV+++LV   V+L+GLKKKL+FIGKEESQL
Sbjct: 225 ----IKPEQQTHVFTKPSFVYFFGSSMSWHPVITKLVRKVVTLSGLKKKLVFIGKEESQL 280

Query: 374 MYV 382
           M+V
Sbjct: 281 MFV 283


>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
 Frame = +2

Query: 2   SGNGEVNCNARYYVHGVIEXXXXXXXXXXXX---GGKDGKGSSL-----VCGFLTKVLVC 157
           S + +     RY + GV+E                 K G G++      + GFL +++VC
Sbjct: 187 SSDSKDGSKGRYSLRGVLESVSPVSVIPCSVVTRTSKSGSGTNFSTPSNLRGFLAQIMVC 246

Query: 158 ECKLCSSSDPGRVLCGVHERHTIDSFTKSFIVYFYDFASCWHPVVSRLVGNYVSLTGLKK 337
           EC+LC S +    L    +      FTK  I+YF    S WHP+ ++L+GN + ++ LKK
Sbjct: 247 ECELCCSKEGLMSLDDPRKGLRGHCFTKPQILYFCGSGSSWHPLFTKLIGNVICISHLKK 306

Query: 338 KLIFIGKEESQLMYVT 385
           KL+FIGKEESQLMYVT
Sbjct: 307 KLVFIGKEESQLMYVT 322


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/85 (49%), Positives = 57/85 (67%)
 Frame = +2

Query: 131 GFLTKVLVCECKLCSSSDPGRVLCGVHERHTIDSFTKSFIVYFYDFASCWHPVVSRLVGN 310
           GFL +++VCEC+LC S +    L    +      FTK  I+YF    S WHP+ ++L+GN
Sbjct: 380 GFLAQIMVCECELCCSKEVLMSLDDPRKGLRGHCFTKPQILYFCGSGSSWHPLFTKLIGN 439

Query: 311 YVSLTGLKKKLIFIGKEESQLMYVT 385
            + ++ LKKKL+FIGKEESQLMYVT
Sbjct: 440 VICISHLKKKLVFIGKEESQLMYVT 464


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +2

Query: 131 GFLTKVLVCECKLCSSSDPGRVLCGVHERHTIDSFTKSFIVYFYDFASCWHPVVSRLVG- 307
           GF+  +++CEC+ C+S +P  +           SF    IVY    AS WHPV+S+ VG 
Sbjct: 224 GFMAHIMICECRSCTSKEPMSLPDNSVRELNTHSFVNPTIVYLCGSASSWHPVLSKFVGL 283

Query: 308 NYVSLTGLKKKLIFIGKEESQLMYVT 385
            +++  GLKKKL+ IGK ES LMYVT
Sbjct: 284 GFINFWGLKKKLVSIGKAESCLMYVT 309


Top