BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044555
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...   135   1e-29
ref|YP_006280924.1| NADH dehydrogenase subunit 4 (mitochondrion)...    60   7e-07
ref|YP_004935284.1| NADH dehydrogenase subunit 4 (mitochondrion)...    60   7e-07
sp|P93313.2|NU4M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct...    60   9e-07
ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus] g...    60   9e-07

>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score =  135 bits (340), Expect = 1e-29
 Identities = 87/178 (48%), Positives = 97/178 (54%)
 Frame = -3

Query: 645 FRSKGLRFPNPVGPGGFVCPSLANRIPAQRHCLCTPYRSRSVFATAGKAVVEAKPIATPT 466
           FR KGLR PNPVG G     + A  I + R+ +  PYRSRSVFATAG+AVVEAKPIATPT
Sbjct: 203 FRRKGLRIPNPVG-GRTALFAPAWLIASPRNDILAPYRSRSVFATAGEAVVEAKPIATPT 261

Query: 465 IKYEIWPLLKDLMEWPSPPKSAYVIGELMAGNNLWF*YPIR*E**EWKVQVGW*A***ET 286
           IKYEI PLLKDLMEWPSPPKSAYVI ELM                               
Sbjct: 262 IKYEIGPLLKDLMEWPSPPKSAYVIWELM------------------------------- 290

Query: 285 I*LGSESTSWVKYFFVAKCYGLNAELLTLLVRMGVYPKVFLDCMHTSVSNLVQHGKFN 112
               ++S  W+    +             L   G +  VF D MHT VSNLVQHGKFN
Sbjct: 291 ----NQSPGWLVSLVIG----------DYLAWFGEHLLVFPDRMHTYVSNLVQHGKFN 334


>ref|YP_006280924.1| NADH dehydrogenase subunit 4 (mitochondrion) [Spirodela polyrhiza]
           gi|385252625|gb|AFI54933.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Spirodela polyrhiza]
          Length = 493

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 198 LVRMGVYPKVFLDCMHTSVSNLVQHGKFN 112
           LVRMGV+PKVF DCMHTSVSNLVQHGKFN
Sbjct: 465 LVRMGVHPKVFPDCMHTSVSNLVQHGKFN 493


>ref|YP_004935284.1| NADH dehydrogenase subunit 4 (mitochondrion) [Silene conica]
           gi|357967262|ref|YP_004935285.1| NADH dehydrogenase
           subunit 4 (mitochondrion) [Silene conica]
           gi|346228154|gb|AEO21071.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Silene conica]
           gi|346228156|gb|AEO21072.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Silene conica]
          Length = 495

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = -3

Query: 198 LVRMGVYPKVFLDCMHTSVSNLVQHGKFN 112
           +VRMGV+PKVFLDC+HTSVSNLVQHGKFN
Sbjct: 467 VVRMGVHPKVFLDCIHTSVSNLVQHGKFN 495


>sp|P93313.2|NU4M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 4; AltName:
           Full=NADH dehydrogenase subunit 4
          Length = 495

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 198 LVRMGVYPKVFLDCMHTSVSNLVQHGKFN 112
           LV MGVYPKVFLDCMHTSVSNLVQHGKF+
Sbjct: 467 LVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495


>ref|YP_717159.1| NADH dehydrogenase subunit 4 [Brassica napus]
           gi|37591106|dbj|BAC98908.1| NADH dehydrogenase subunit 4
           [Brassica napus]
          Length = 495

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 198 LVRMGVYPKVFLDCMHTSVSNLVQHGKFN 112
           LV MGVYPKVFLDCMHTSVSNLVQHGKF+
Sbjct: 467 LVWMGVYPKVFLDCMHTSVSNLVQHGKFH 495