BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044519
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    92   3e-17
dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]            88   6e-16
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    86   2e-15
dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana] g...    84   1e-14
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...    82   6e-14

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = -3

Query: 256 LQSSDSPGMKLVNNFFDGTGFSNWKRSVLIALSARNKLCFVDGSFPKPVSTSPYLKNWSR 77
           L SSD+PGM L+N  FDG+ + NWKR VLI+LSA+NKL F+ G++ KP       + W R
Sbjct: 39  LASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKPDKEDLLFEQWRR 98

Query: 76  CNDMVISWILCALSK 32
           C+DMV++W+L +LSK
Sbjct: 99  CSDMVLAWLLNSLSK 113


>dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]
          Length = 556

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/75 (49%), Positives = 53/75 (70%)
 Frame = -3

Query: 256 LQSSDSPGMKLVNNFFDGTGFSNWKRSVLIALSARNKLCFVDGSFPKPVSTSPYLKNWSR 77
           L +SD+PG  + +  FDGT + +WK S+ IAL A+NKL F+DGS P+P  + P  + WSR
Sbjct: 19  LTNSDNPGASITSEVFDGTNYDDWKISIKIALDAKNKLVFIDGSVPRPPESDPMFRIWSR 78

Query: 76  CNDMVISWILCALSK 32
           CN +V SW+L ++SK
Sbjct: 79  CNSLVKSWLLNSVSK 93


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 37/75 (49%), Positives = 53/75 (70%)
 Frame = -3

Query: 256 LQSSDSPGMKLVNNFFDGTGFSNWKRSVLIALSARNKLCFVDGSFPKPVSTSPYLKNWSR 77
           L + DSPG  LV+   DGT FS+WK ++ ++L A+NK+ FVDG+ P+P  + P  + WSR
Sbjct: 66  LSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSLYAKNKIAFVDGTLPRPPESDPSFRVWSR 125

Query: 76  CNDMVISWILCALSK 32
           CN MV SWIL +++K
Sbjct: 126 CNSMVKSWILNSVTK 140


>dbj|BAB09070.1| unnamed protein product [Arabidopsis thaliana]
           gi|26450382|dbj|BAC42306.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|28973203|gb|AAO63926.1| unknown protein [Arabidopsis
           thaliana]
          Length = 357

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/75 (46%), Positives = 52/75 (69%)
 Frame = -3

Query: 256 LQSSDSPGMKLVNNFFDGTGFSNWKRSVLIALSARNKLCFVDGSFPKPVSTSPYLKNWSR 77
           L + D+PG  +V+   DG+ FS+WK ++ +AL A+NK+ FVDG+ P+P    P  + WSR
Sbjct: 69  LSNGDNPGTTIVSEVLDGSNFSSWKIAMFVALDAKNKIAFVDGTLPRPPEFDPSFRVWSR 128

Query: 76  CNDMVISWILCALSK 32
           CN MV SWIL +++K
Sbjct: 129 CNSMVKSWILNSVTK 143


>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268497|emb|CAB78748.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1433

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/77 (44%), Positives = 54/77 (70%)
 Frame = -3

Query: 256 LQSSDSPGMKLVNNFFDGTGFSNWKRSVLIALSARNKLCFVDGSFPKPVSTSPYLKNWSR 77
           L SSD PG+ +V++  DGT ++NW  ++ ++L A+NKL FVDGS P+P  +    K WSR
Sbjct: 70  LHSSDHPGLNIVSHILDGTNYNNWSIAMRMSLDAKNKLSFVDGSLPRPDVSDRMFKIWSR 129

Query: 76  CNDMVISWILCALSKVY 26
           CN MV +W+L  +++++
Sbjct: 130 CNSMVKTWLLNVVTEMW 146