BLASTX nr result

ID: Cnidium21_contig00044495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044495
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   178   4e-43
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              175   3e-42
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   175   3e-42
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42

>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
           predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  179 bits (453), Expect = 3e-43
 Identities = 79/115 (68%), Positives = 97/115 (84%)
 Frame = -2

Query: 347 FFGPHGTGKTSCARIFARALNCQSMEHPKPCGVCGSCTAHDKGRSQYIQEVGAVSTFDHQ 168
           F+GPHGTGKTSCARIF+RALNCQS+EHPKPCG C SC +HD G+S+ I+EVG VS FD +
Sbjct: 491 FYGPHGTGKTSCARIFSRALNCQSLEHPKPCGYCNSCISHDMGKSRNIREVGPVSNFDFK 550

Query: 167 SIVDILNSALAHRHTSQYRILIFDDCDTLSTECWSVISKVMDRGPRRVVFVLVSS 3
           SI+D+L++ +  +  SQYR+ IFDDCDTL+ +CWS ISKV+DR PRRVVFVLV S
Sbjct: 551 SIIDLLDNMIISQTPSQYRVFIFDDCDTLAPDCWSAISKVIDRAPRRVVFVLVCS 605


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score =  178 bits (452), Expect = 4e-43
 Identities = 81/115 (70%), Positives = 96/115 (83%)
 Frame = -2

Query: 347 FFGPHGTGKTSCARIFARALNCQSMEHPKPCGVCGSCTAHDKGRSQYIQEVGAVSTFDHQ 168
           F+GPHGTGKTSCARIFARALNCQS+EHPKPCG C SC +HD G+S+ I+EVG VS FD  
Sbjct: 493 FYGPHGTGKTSCARIFARALNCQSLEHPKPCGYCNSCISHDMGKSRNIREVGPVSNFDFG 552

Query: 167 SIVDILNSALAHRHTSQYRILIFDDCDTLSTECWSVISKVMDRGPRRVVFVLVSS 3
           +IVD+L++ +     SQYR+ IFD CDTLS++CWS ISKV+DR PRRVVFVLVSS
Sbjct: 553 NIVDLLDNMIISHLPSQYRVFIFDGCDTLSSDCWSAISKVIDRAPRRVVFVLVSS 607


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = -2

Query: 347 FFGPHGTGKTSCARIFARALNCQSMEHPKPCGVCGSCTAHDKGRSQYIQEVGAVSTFDHQ 168
           F+GPHGTGKTSCARIFARALNC SMEHPKPCG C SC AHD G+S+ I+EVG VS  D +
Sbjct: 307 FYGPHGTGKTSCARIFARALNCPSMEHPKPCGFCNSCIAHDMGKSRNIREVGPVSNLDFE 366

Query: 167 SIVDILNSALAHRHTSQYRILIFDDCDTLSTECWSVISKVMDRGPRRVVFVLVSS 3
            I+++L++ +A +  +QYR+ IFDDCDTLS +CWS ISK++DR PRR+VFVLVSS
Sbjct: 367 GIMNLLDNVIASQLPTQYRVFIFDDCDTLSPDCWSAISKLIDRAPRRMVFVLVSS 421


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = -2

Query: 347 FFGPHGTGKTSCARIFARALNCQSMEHPKPCGVCGSCTAHDKGRSQYIQEVGAVSTFDHQ 168
           F+GPHGTGKTSCARIFARALNC SMEHPKPCG C SC AHD G+S+ I+EVG VS  D +
Sbjct: 495 FYGPHGTGKTSCARIFARALNCPSMEHPKPCGFCNSCIAHDMGKSRNIREVGPVSNLDFE 554

Query: 167 SIVDILNSALAHRHTSQYRILIFDDCDTLSTECWSVISKVMDRGPRRVVFVLVSS 3
            I+++L++ +A +  +QYR+ IFDDCDTLS +CWS ISK++DR PRR+VFVLVSS
Sbjct: 555 GIMNLLDNVIASQLPTQYRVFIFDDCDTLSPDCWSAISKLIDRAPRRMVFVLVSS 609


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
           predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = -2

Query: 347 FFGPHGTGKTSCARIFARALNCQSMEHPKPCGVCGSCTAHDKGRSQYIQEVGAVSTFDHQ 168
           F+GPHGTGKTSCARIFARALNCQS+EHPKPCG C SC +HD G+S+ I+EVG VS FD +
Sbjct: 487 FYGPHGTGKTSCARIFARALNCQSLEHPKPCGFCNSCISHDMGKSRNIREVGPVSNFDFE 546

Query: 167 SIVDILNSALAHRHTSQYRILIFDDCDTLSTECWSVISKVMDRGPRRVVFVLVSS 3
           SI+D+L++ + ++  S YR+ IFDDCD+LS +CWS I KV+DR PRRVVFVLV S
Sbjct: 547 SIMDLLDNMIVYQIPSLYRVFIFDDCDSLSPDCWSAILKVIDRAPRRVVFVLVCS 601


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