BLASTX nr result

ID: Cnidium21_contig00044493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044493
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546630.1| PREDICTED: PHD finger protein rhinoceros-lik...   108   6e-22
ref|XP_003545699.1| PREDICTED: protein Jade-3-like [Glycine max]      108   6e-22
ref|XP_002531248.1| mixed-lineage leukemia protein, putative [Ri...   105   3e-21
ref|XP_002331305.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|NP_566491.1| RING/FYVE/PHD zinc finger-containing protein [A...    96   3e-18

>ref|XP_003546630.1| PREDICTED: PHD finger protein rhinoceros-like [Glycine max]
          Length = 317

 Score =  108 bits (269), Expect = 6e-22
 Identities = 64/138 (46%), Positives = 80/138 (57%), Gaps = 26/138 (18%)
 Frame = +1

Query: 37  DFPPLKRFRLIQQQQELQLKS--------LPAKKRKHFTTNSSPPPT-------FSLPAK 171
           D PPLKR RL+QQQQ+ + +         LPAKKRK   T S P PT       +SLPAK
Sbjct: 10  DLPPLKRLRLLQQQQQQKEEHQYYDSSSPLPAKKRKESRTLSPPSPTTTKTVYNYSLPAK 69

Query: 172 KRVSAFRP-----------FDLNLEYPFSEDDELGQIKKPLEKIQENVNVDDDGIVCAVC 318
           KRV A +P           FDLN+EY  S ++           ++E+ + D+DG++C VC
Sbjct: 70  KRVWALQPQSPPSNDVVPAFDLNVEYTPSPNNH--------GDLEEDHSEDEDGVLCCVC 121

Query: 319 QSTDADPLDPIVFCDGCD 372
           QSTD DP DPIVFCDGCD
Sbjct: 122 QSTDGDPADPIVFCDGCD 139


>ref|XP_003545699.1| PREDICTED: protein Jade-3-like [Glycine max]
          Length = 317

 Score =  108 bits (269), Expect = 6e-22
 Identities = 64/138 (46%), Positives = 80/138 (57%), Gaps = 26/138 (18%)
 Frame = +1

Query: 37  DFPPLKRFRLIQQQQELQLKS--------LPAKKRKHFTTNSSPPPT-------FSLPAK 171
           D PPLKR RL+QQQQ+ + +         LPAKKRK   T S P PT       +SLPAK
Sbjct: 10  DLPPLKRLRLLQQQQQQKEEHQYYDSSSPLPAKKRKESRTLSPPSPTTTKTVYNYSLPAK 69

Query: 172 KRVSAFRP-----------FDLNLEYPFSEDDELGQIKKPLEKIQENVNVDDDGIVCAVC 318
           KRV A +P           FDLN+EY  S ++           ++E+ + D+DG++C VC
Sbjct: 70  KRVWALQPQSPPSNDVVPAFDLNVEYTPSPNNH--------GDLEEDHSEDEDGVLCCVC 121

Query: 319 QSTDADPLDPIVFCDGCD 372
           QSTD DP DPIVFCDGCD
Sbjct: 122 QSTDGDPADPIVFCDGCD 139


>ref|XP_002531248.1| mixed-lineage leukemia protein, putative [Ricinus communis]
           gi|223529167|gb|EEF31145.1| mixed-lineage leukemia
           protein, putative [Ricinus communis]
          Length = 344

 Score =  105 bits (263), Expect = 3e-21
 Identities = 73/173 (42%), Positives = 87/173 (50%), Gaps = 55/173 (31%)
 Frame = +1

Query: 19  MENNFKDFPPLKRFRLIQQQQELQLK-------------SLPAKKRKHFTTNSSPPPT-- 153
           M+  F+  PPLKR RL+QQQQ+ + +              LPAKKRK       P PT  
Sbjct: 1   MDTKFQALPPLKRLRLLQQQQQQEEEVEENKENETIISLQLPAKKRKESRYPLLPEPTTT 60

Query: 154 FSLPAKKRVSAFRP------------FDLNLEY-PFSEDDELGQI----KKPLEKI---- 270
           + LPAKKRV AF+P            FDLN+EY P   D E  QI    K PL  I    
Sbjct: 61  YCLPAKKRVWAFQPDFISGNGDPLSPFDLNVEYKPSFVDRETKQIEDHSKIPLPNITLQE 120

Query: 271 -------------------QENVNVDDDGIVCAVCQSTDADPLDPIVFCDGCD 372
                              +EN + +DDGI+CA+CQSTD DP DPIVFCDGCD
Sbjct: 121 HGNSKISNQCETEEENKEEEENDDDEDDGILCAICQSTDGDPTDPIVFCDGCD 173


>ref|XP_002331305.1| predicted protein [Populus trichocarpa] gi|222873888|gb|EEF11019.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 62/152 (40%), Positives = 82/152 (53%), Gaps = 34/152 (22%)
 Frame = +1

Query: 19  MENNFKDFPPLKRFRLIQQQQELQLKS-------LPAKKRKH----FTTNSSPPPTFS-- 159
           M+  F+  PP KR  L++QQQ+ + +        LPAKKRK        ++ P  T S  
Sbjct: 1   MDTKFQALPPFKRHTLLEQQQQQENEENVPFSSQLPAKKRKESRNPLLADADPKGTTSAA 60

Query: 160 --LPAKKRVSAFRP-----------FDLNLEYPFSEDDELG----QIKKPLEKIQENVNV 288
             LP KKRV A  P            DLN+EY  S ++E+       K PL  I ++++ 
Sbjct: 61  YCLPTKKRVWALHPDLVSGKPLSPLIDLNVEYIPSSNEEIKADEENKKTPLPIINKSIDK 120

Query: 289 ----DDDGIVCAVCQSTDADPLDPIVFCDGCD 372
               +DDGI+CA+CQSTD DP DPIVFCDGCD
Sbjct: 121 YKEEEDDGILCAICQSTDGDPTDPIVFCDGCD 152


>ref|NP_566491.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|21618148|gb|AAM67198.1| similar to zinc-finger
           protein [Arabidopsis thaliana]
           gi|332642040|gb|AEE75561.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 341

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 56/174 (32%)
 Frame = +1

Query: 19  MENNFKDFPPLKRFRLIQQ------------QQELQLKSLPAKKRKHFTTN-------SS 141
           M+  ++D PPLKR RL+Q+            Q E++   LPAKKRK    +       +S
Sbjct: 1   MDAQYQDLPPLKRLRLLQRDLEAAQQHQLPNQPEMKSLQLPAKKRKQTRVDYDDDDAENS 60

Query: 142 PPPTFSLPAKKRVSA------------FRPFDLNLEY-PFSEDDELGQ-----IKKPLEK 267
            P    LPAKKR+ A            F PFDLN+EY P+ E+  + +     ++  LE 
Sbjct: 61  NPTYHCLPAKKRIWAIDPDLLSGGGNPFSPFDLNVEYKPYVEEKSIEKKSTLNVESSLEV 120

Query: 268 IQ----ENVNV---------------DDDGIVCAVCQSTDADPLDPIVFCDGCD 372
            +    EN++                D+DGI+CAVCQSTD DPL+PIVFCDGCD
Sbjct: 121 EEDDDKENIDPLGKGKALDLSDREVEDEDGIMCAVCQSTDGDPLNPIVFCDGCD 174


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