BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044443
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   100   9e-20
ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [S...    85   7e-15
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    85   7e-15
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    85   7e-15
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    84   2e-14

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
 Frame = -1

Query: 423 WKEEMSGEYTVKSAYRLLQSQKEMEILSAS----RDLWKEIWRIKAPPKVLNMIWRALVQ 256
           W  +  GEYT +S Y  L+  ++   L AS      +W ++W++ APPK+LN  WRA   
Sbjct: 471 WSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARN 530

Query: 255 CLPTRTNLYAKRVPVSVLCPMCSGGEESIMHILVRCPFASQCWRQRG-AVCQDAGISFDS 79
           CLPTR  L  + V   + CP+C    E+ +H LV C  A   W + G A+ Q    SF  
Sbjct: 531 CLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVD 590

Query: 78  WLKCMLDRSDKDDHGEIVTLCWSIW 4
           WL  M    D     + + +CW +W
Sbjct: 591 WLATMFAYCDFVVFAKYLAVCWGLW 615


>ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [Sorghum bicolor]
           gi|241925782|gb|EER98926.1| hypothetical protein
           SORBIDRAFT_02g025125 [Sorghum bicolor]
          Length = 457

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
 Frame = -1

Query: 423 WKEEMSGEYTVKSAYRLLQSQK-----EMEILSASRDLWKEIWRIKAPPKVLNMIWRALV 259
           W+ E  G Y+VKSAYRL+   +     +  +  +    W EIW++K PPKV    WR L 
Sbjct: 139 WEPEKHGVYSVKSAYRLIDKGRTNGGHQEAVGGSGNSCWSEIWKLKVPPKVKVFWWRVLH 198

Query: 258 QCLPTRTNLYAKRVPVSVLCPMCSGGEESIMHILVRCPFASQCWRQ 121
           + LPTR  L+ K +     C  C    ESI H+L+ C  A   W Q
Sbjct: 199 EFLPTRLALHRKHIEPIANCDACGADSESIQHVLMECQIAKSFWEQ 244


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
 Frame = -1

Query: 429 LYWKEEMSGEYTVKSAYRLLQSQKEMEILSASRDLWKEIWRIKAPPKVLNMIWRALVQCL 250
           + WK E  G+Y+V+SAY L   +            W +IWR+K PPK+ N +WR     L
Sbjct: 133 IIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVL 192

Query: 249 PTRTNLYAKRVPVSVLCPMCSGGEESIMHILVRCPFASQCWR--QRGAVCQDAGISFDSW 76
           PTR  L  K V     C  CS   E + H+   C F  Q W+     +  Q A I FD+ 
Sbjct: 193 PTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTA 252

Query: 75  LKCMLDRSDKD--DHGEIVTLCWSIWQ 1
              + D   +   +  +I    WS+W+
Sbjct: 253 SAVIFDLLQRFTLEQSQIFVTMWSLWK 279


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
 Frame = -1

Query: 429 LYWKEEMSGEYTVKSAYRLLQSQKEMEILSASRDLWKEIWRIKAPPKVLNMIWRALVQCL 250
           + WK E  G+Y+V+SAY L   +            W +IWR+K PPK+ N +WR     L
Sbjct: 226 IIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVL 285

Query: 249 PTRTNLYAKRVPVSVLCPMCSGGEESIMHILVRCPFASQCWR--QRGAVCQDAGISFDSW 76
           PTR  L  K V     C  CS   E + H+   C F  Q W+     +  Q A I FD+ 
Sbjct: 286 PTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTA 345

Query: 75  LKCMLDRSDKD--DHGEIVTLCWSIWQ 1
              + D   +   +  +I    WS+W+
Sbjct: 346 SAVIFDLLQRFTLEQSQIFVTMWSLWK 372


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
 Frame = -1

Query: 426 YWKEEMSGEYTVKSAYRLLQSQKEMEILSASRDLWKEIWRIKAPPKVLNMIWRALVQCLP 247
           YW  +  G Y VK+ YRLLQ     ++       W + W++K P KV N++W+    C+ 
Sbjct: 398 YWLFDDKGNYLVKNCYRLLQG----DLGRPETSFWNKFWKLKIPTKVRNLMWKICSNCIR 453

Query: 246 TRTNLYAKRVPVSVLCPMCSGGEESIMHILVRCPFASQCWRQRG-AVCQDAGISFDSWLK 70
           T  NL  + V +  LC  C+   E++ H+L  C  A +CW   G            SW++
Sbjct: 454 TAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSFPTESPICSWIQ 513

Query: 69  CMLDRSDKDDHGEIVTLCWSIW 4
                + +D   ++  +C S+W
Sbjct: 514 NFFIDNHEDTCAKMALVCGSLW 535