BLASTX nr result

ID: Cnidium21_contig00044441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044441
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522300.1| exonuclease, putative [Ricinus communis] gi|...    71   8e-11
ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease ...    68   7e-10
ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]    68   7e-10
gb|ABY56082.1| exonuclease [Cucumis sativus]                           68   7e-10
ref|NP_174256.2| exonuclease 1 [Arabidopsis thaliana] gi|3321929...    68   9e-10

>ref|XP_002522300.1| exonuclease, putative [Ricinus communis]
           gi|223538553|gb|EEF40158.1| exonuclease, putative
           [Ricinus communis]
          Length = 629

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = -2

Query: 180 QVIKHLKYSKVVVPPLYEEFFWKALLTFQHQRVYDPIKEDI 58
           +VIKHLKYS + VPPLYEE F KA+LTFQHQRVYDPI EDI
Sbjct: 221 KVIKHLKYSTISVPPLYEESFRKAILTFQHQRVYDPIAEDI 261


>ref|XP_004169842.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 1-like [Cucumis
           sativus]
          Length = 685

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = -2

Query: 198 YICYEIQVIKHLKYSKVVVPPLYEEFFWKALLTFQHQRVYDPIKEDI 58
           ++ YE +VI+HL+YS V VP LYEE F KA+LTFQHQRVYDPI EDI
Sbjct: 246 FLSYE-KVIRHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDI 291


>ref|XP_004147427.1| PREDICTED: exonuclease 1-like [Cucumis sativus]
          Length = 685

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = -2

Query: 198 YICYEIQVIKHLKYSKVVVPPLYEEFFWKALLTFQHQRVYDPIKEDI 58
           ++ YE +VI+HL+YS V VP LYEE F KA+LTFQHQRVYDPI EDI
Sbjct: 246 FLSYE-KVIRHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDI 291


>gb|ABY56082.1| exonuclease [Cucumis sativus]
          Length = 336

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = -2

Query: 198 YICYEIQVIKHLKYSKVVVPPLYEEFFWKALLTFQHQRVYDPIKEDI 58
           ++ YE +VI+HL+YS V VP LYEE F KA+LTFQHQRVYDPI EDI
Sbjct: 246 FLSYE-KVIRHLRYSTVAVPHLYEESFKKAILTFQHQRVYDPITEDI 291


>ref|NP_174256.2| exonuclease 1 [Arabidopsis thaliana] gi|332192990|gb|AEE31111.1|
           exonuclease 1 [Arabidopsis thaliana]
          Length = 665

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = -2

Query: 183 IQVIKHLKYSKVVVPPLYEEFFWKALLTFQHQRVYDPIKEDI 58
           ++VIKHLKYS V VPPLYEE F +ALLTF+HQRVYDP  EDI
Sbjct: 180 LRVIKHLKYSTVSVPPLYEESFKRALLTFKHQRVYDPNAEDI 221


Top