BLASTX nr result

ID: Cnidium21_contig00044437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00044437
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279067.1| PREDICTED: uncharacterized protein LOC100259...   200   1e-49
ref|XP_004144963.1| PREDICTED: uncharacterized protein LOC101216...   179   2e-43
ref|XP_003550090.1| PREDICTED: MHD domain-containing death-induc...   171   7e-41
ref|NP_850004.1| clathrin adaptor complexes medium subunit famil...   163   1e-38
ref|XP_002886304.1| hypothetical protein ARALYDRAFT_900447 [Arab...   159   2e-37

>ref|XP_002279067.1| PREDICTED: uncharacterized protein LOC100259662 [Vitis vinifera]
           gi|297736956|emb|CBI26157.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score =  200 bits (508), Expect = 1e-49
 Identities = 96/143 (67%), Positives = 115/143 (80%), Gaps = 3/143 (2%)
 Frame = +2

Query: 53  SGCSIRAMWILNPQHTVVFSRRFPVVERRWRAACKMQEQSLTEDDC---VVPVLPSHSEL 223
           +GCSIRA+WILN   +VVFSRRFPVVER+WR ACK + ++ + D+    V P+LP+ SEL
Sbjct: 2   AGCSIRALWILNNFDSVVFSRRFPVVERQWRTACKAENENSSNDNLNYTVYPLLPTDSEL 61

Query: 224 ATAFADRITREGSTRGFGIRVVKSVKGSDSWVDDPITRHIISLSIRKEPEGEDQLLWPLI 403
           A AF +R  REGS RGFGIRV +S +GSDSWVDDPITRHIISL I K+ E E+ +LWPLI
Sbjct: 62  AAAFVERKKREGSARGFGIRVTQSAEGSDSWVDDPITRHIISLFINKDEERENNMLWPLI 121

Query: 404 LHVKSHFCILVLPLVEPHHLKAY 472
           LH+K H+CILVLPLVEP HLKAY
Sbjct: 122 LHMKGHYCILVLPLVEPQHLKAY 144


>ref|XP_004144963.1| PREDICTED: uncharacterized protein LOC101216895 [Cucumis sativus]
           gi|449472289|ref|XP_004153548.1| PREDICTED:
           uncharacterized protein LOC101206253 [Cucumis sativus]
           gi|449525381|ref|XP_004169696.1| PREDICTED:
           uncharacterized LOC101216895 [Cucumis sativus]
          Length = 625

 Score =  179 bits (455), Expect = 2e-43
 Identities = 89/142 (62%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
 Frame = +2

Query: 56  GCSIRAMWILNPQHTVVFSRRFPVVERRWRAACKMQEQSLTEDDC---VVPVLPSHSELA 226
           GC IRA+WI +    V+FSRRFPVVERRWR ACK++      DD    V PVLP+ SELA
Sbjct: 4   GCGIRAIWIFSNFDAVIFSRRFPVVERRWRTACKIENDRCNSDDIASDVSPVLPNDSELA 63

Query: 227 TAFADRITREGSTRGFGIRVVKSVKGSDSWVDDPITRHIISLSIRKEPEGEDQLLWPLIL 406
            AF +R  REGS  GFGIRV++S +GSDSWVDDPITRHII L ++KE E     LWPLIL
Sbjct: 64  AAFVERKKREGSACGFGIRVIQSYEGSDSWVDDPITRHIIGLHVKKEEE-SSIFLWPLIL 122

Query: 407 HVKSHFCILVLPLVEPHHLKAY 472
           ++KSH+ ILVLPLVEP H+K Y
Sbjct: 123 NIKSHYSILVLPLVEPQHIKHY 144


>ref|XP_003550090.1| PREDICTED: MHD domain-containing death-inducing protein-like
           [Glycine max]
          Length = 627

 Score =  171 bits (432), Expect = 7e-41
 Identities = 89/140 (63%), Positives = 98/140 (70%)
 Frame = +2

Query: 53  SGCSIRAMWILNPQHTVVFSRRFPVVERRWRAACKMQEQSLTEDDCVVPVLPSHSELATA 232
           SGCSIRA+WILN    VVFSRRFPVVE+RWRAAC     + T    +   LP+ S+LA A
Sbjct: 9   SGCSIRAIWILNNLDGVVFSRRFPVVEKRWRAACNSNAHNDTHQ--IFSSLPTDSDLADA 66

Query: 233 FADRITREGSTRGFGIRVVKSVKGSDSWVDDPITRHIISLSIRKEPEGEDQLLWPLILHV 412
           F DR  REGS RGFGIR   S  GSDSWVDDPITRHII L I +E E    LLWPLILH 
Sbjct: 67  FLDRKHREGSARGFGIRKSNSTLGSDSWVDDPITRHIIGLYISREGEENKNLLWPLILHT 126

Query: 413 KSHFCILVLPLVEPHHLKAY 472
           K  + IL+LPLVEP HL AY
Sbjct: 127 KGLYSILILPLVEPIHLNAY 146


>ref|NP_850004.1| clathrin adaptor complexes medium subunit family protein
           [Arabidopsis thaliana]
           gi|18087614|gb|AAL58937.1|AF462850_1 At2g20790/F5H14.24
           [Arabidopsis thaliana] gi|19699154|gb|AAL90943.1|
           At2g20790/F5H14.24 [Arabidopsis thaliana]
           gi|330251979|gb|AEC07073.1| clathrin adaptor complexes
           medium subunit family protein [Arabidopsis thaliana]
          Length = 613

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/143 (56%), Positives = 106/143 (74%), Gaps = 3/143 (2%)
 Frame = +2

Query: 53  SGCSIRAMWILNPQHTVVFSRRFPVVERRWRAACKMQEQSLTEDDCVVPVLPSHSELATA 232
           SGCSIRA+WI+N Q TVVFSRRFPVVE++W +A K + ++   D   +P LP+  +++ +
Sbjct: 3   SGCSIRALWIINNQDTVVFSRRFPVVEKQWCSAYKTENENTGLD---LPRLPTDQQISDS 59

Query: 233 FADRITREGSTRGFGIRVVKSVKGSDSWVDDPITRHIISLSIRKEPEGED---QLLWPLI 403
           F  R  REGSTRG+GIRV +S KGSDSWVDDPITRHIISL + +E + +D    +LWP+ 
Sbjct: 60  FTRRKRREGSTRGYGIRVAQSTKGSDSWVDDPITRHIISLCLTEEDDDDDDERNILWPIA 119

Query: 404 LHVKSHFCILVLPLVEPHHLKAY 472
           LH K+ + ILVLPLVEP  +K Y
Sbjct: 120 LHTKALYSILVLPLVEPKEMKDY 142


>ref|XP_002886304.1| hypothetical protein ARALYDRAFT_900447 [Arabidopsis lyrata subsp.
           lyrata] gi|297332144|gb|EFH62563.1| hypothetical protein
           ARALYDRAFT_900447 [Arabidopsis lyrata subsp. lyrata]
          Length = 613

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/147 (53%), Positives = 103/147 (70%), Gaps = 7/147 (4%)
 Frame = +2

Query: 53  SGCSIRAMWILNPQHTVVFSRRFPVVERRWRAACKMQEQSLTEDDCVVPVLPSHSELATA 232
           SGCSIRA+WI+N Q  VVFSRRFPVVE++W +  K + ++        P LP+  +++ A
Sbjct: 3   SGCSIRALWIINNQEAVVFSRRFPVVEKQWCSVYKSENEN-------TPRLPTDQQISNA 55

Query: 233 FADRITREGSTRGFGIRVVKSVKGSDSWVDDPITRHIISLSIRKEPEGEDQ-------LL 391
           F  R  REGSTRG+GIRV +S KGSDSWVDDPITRHIISL + +E + +D+       +L
Sbjct: 56  FTRRKRREGSTRGYGIRVAQSTKGSDSWVDDPITRHIISLCLSEEDDDDDESDKNERNIL 115

Query: 392 WPLILHVKSHFCILVLPLVEPHHLKAY 472
           WP+ LH K+ + ILVLPLVEP  +K Y
Sbjct: 116 WPIALHTKALYSILVLPLVEPKEMKDY 142


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